Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00042 ATGTGCTTAGCCTCCAAGCCATCCATAAAACTATTTCCTAGGGGAGTGGAGCAAAGACCAGAGAGGTGCGACGACGGAGACGGCGGAAAAGCCTTCGGAGACCACTATGCAGCGGCACGCGACGTGGTTCTCTGTCCGTTTGTAGGCTGCAAACGGAACAAGCTCCACCGGCGGTTTCGGCCACTGAAATTGGTGATTTGCGTGAAGAACCACTTCAAGCGAAACCACTGCCCAAAGATGTACACGTGCGAGCGGAACTCAGCCGGAGTGAGATCGGATAATTTGGTGACGCCGTGGACGGCGGAGGGGTCGAGCTTAGAGGGGGTGTAA 330 0.5576 MCLASKPSIKLFPRGVEQRPERCDDGDGGKAFGDHYAAARDVVLCPFVGCKRNKLHRRFRPLKLVICVKNHFKRNHCPKMYTCERNSAGVRSDNLVTPWTAEGSSLEGV 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00042 109 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 44 85 IPR044300 GO:0010044|GO:0010447
Gma19g00042 109 PANTHER ZINC FINGER PROTEIN STOP1 HOMOLOG 44 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00042 Gma-Chr19 342965 344358 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00042 25 87 C2H2 Transcription Factor Family AT5G22890 50.794 2.80e-17 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00042 - - gmx:100796506 91.6633