Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00041 ATGAATACGACGCCGTTTATGGACAAGCAGATTATGGATCTCACTCACGCTCACGGATCTTCTTCTTCTTCTTCCACTACGCAGTTGCAGAGCAAGGACTTCATTGACCTCATGAAAGAACCGCCACAAAACCAACATAACCATCACCATCATCATCTCGAAGATGAAGATGAAGAAGAAAAAGCGAGTCGTGGCAATGGGATCAGCAAAGACGACATCGTTCCCAGCTACGATTTCCAACCGATTCGCCCTCTCGCCGCTTCCAATTCCAATAATTTCGATTCCGCCGCATTCTCTCGCCCTTGGAACTCCGATTCCAACTCCAACGCTTCCCCTCCCATCCTCAAAAATTACAATTCTCTGGATTCAATGGAACCTGCGAAAGTCATTGTAGAAAAGGACCAAAGTGCTTTTGATGCTACAATGTTGTCTGAGATTGATCGTACCGTGAAGAAACATATGGAAAATATGCTTCATGTTCTGGAAGGTGTTAGTGCGCGGTTAACACAACTAGAAACCAGAACCCACCATCTTGAAAATTCCGTGGATGATTTGAAGGTATCGGTTGGAAATAGTCATGGTAGCACTGATGGAAAATTGAGGCAGATGGAGAATAGTCTTCGAGAGGTACAATCAGGGGTGCAGACTATCAAGGACAAGCAAGATATTGTGCAAGCTCAGCTGCAACTGGCAAAGCTAGAAGTGTCAAAGACGGATCCGCAATCAGAAACACAAACTAGCACAATTACTGATCCTGTTCAGCAAGCTGCATTTGCTCCTGGGCAAACTCAACCACAGCTTCCTACCCCTGCAAATCTTCCACAATCAATCCCTATTGTTCCTCCCCCTAATGCACCTCCTCAACCTTCCCCACAACAGGGTTTGCCACCTCCAGTTCATCTTCCAAACCAATTCCCTCAAAACCAAATCCCAGCTGCTCCTCAGAGAGATCAATACTTCCCACCACCGGTTCAGTCTCAGGAAACACCAAATCAGCAATACCAACTTCCGTTATCTCAGCAGCCACATGCTCAGCCCGGGGCACCACCGCATCAGCAATATCAACAGATCCCGCATCCCCAGTACCCTCAGCCAGCACCTCATCTACCTCAACAGCAGCCACCGTCGCATCCATCCATGAATCCGCCTCAACTACAATCTTCACTTGGTCACCATGTTGAGGAACCACCTTATCCTCCTCAGAATTATCCTCCCAATGTCCGCCAGCCACCATCTCAGTCACCCACCGGTCCTCCTCCTCCCCAACAGTTCTATGGGACACCACCTCATGCATATGAACCACCATCAAGCAGATCTGGTTCAGGCTATTCTTCTGGATATGGTACACTATCTGGCCCTGCCGAGCAATATCGTTATGGTGGACCACCTCAGTATGCTGGCACTCCTGCACTAAAACCACAACAACTGCCAACTGCTTCAGTGGCTCCGAGTGGTGGTAGCGGTTACCCTCAGCTCCCAACTGCCAGGGTACTCCCGCAAGCAATACCAACTGCATCTGCAGTGAGTGGTGGCTCAGGTTCTGCTGGAACTGGAGGCAGGGTTTCTGTCGATGATGTGGTCGACAAAGTTTCTACTATGGGATTCCCTAGAGACCATGTGAGGGCCACGGTTCGGAAGCTGACAGAGAATGGTCAGTCTGTTGACCTAAATGCAGTGCTGGATAAGCTCATGAATGATGGCGAAGTCCAACCCCCTCGAGAGGAGCTCTTTGTTGATGCAGGAATATTGGCTATTGAGCATGTTGATTTTGATGGGATTAAGCGTCTGCCTTCGGTAACTGGTGGTGAAATTGCGTCAACCTTTCACAATCTAAAGTCTGTTAAGCTTAGACATTGCGACCTTATTGAGGAGATTATGATTAGCGAGGATAAACTGATTCATTTTTCTGGTGTTGCTATGGGGCAAACATTCTCCACCAACGCACAAGAGAGGCGCACGCACCACGCTCTCGCTCTCACTCTCAGCTCCTCCTCCTCCTCCGTCCAATCGCCGCCACTAACCGCCATCGTCGTCCGCCGCCACCGCCTCTGCTTCCATTCCACGTCTCAGGTCCCTTTGTATTTCCGGAAGTGTTTCAGACAACATAAGCTGGCTTATTCTTTCTAG 2127 0.4904 MNTTPFMDKQIMDLTHAHGSSSSSSTTQLQSKDFIDLMKEPPQNQHNHHHHHLEDEDEEEKASRGNGISKDDIVPSYDFQPIRPLAASNSNNFDSAAFSRPWNSDSNSNASPPILKNYNSLDSMEPAKVIVEKDQSAFDATMLSEIDRTVKKHMENMLHVLEGVSARLTQLETRTHHLENSVDDLKVSVGNSHGSTDGKLRQMENSLREVQSGVQTIKDKQDIVQAQLQLAKLEVSKTDPQSETQTSTITDPVQQAAFAPGQTQPQLPTPANLPQSIPIVPPPNAPPQPSPQQGLPPPVHLPNQFPQNQIPAAPQRDQYFPPPVQSQETPNQQYQLPLSQQPHAQPGAPPHQQYQQIPHPQYPQPAPHLPQQQPPSHPSMNPPQLQSSLGHHVEEPPYPPQNYPPNVRQPPSQSPTGPPPPQQFYGTPPHAYEPPSSRSGSGYSSGYGTLSGPAEQYRYGGPPQYAGTPALKPQQLPTASVAPSGGSGYPQLPTARVLPQAIPTASAVSGGSGSAGTGGRVSVDDVVDKVSTMGFPRDHVRATVRKLTENGQSVDLNAVLDKLMNDGEVQPPREELFVDAGILAIEHVDFDGIKRLPSVTGGEIASTFHNLKSVKLRHCDLIEEIMISEDKLIHFSGVAMGQTFSTNAQERRTHHALALTLSSSSSSVQSPPLTAIVVRRHRLCFHSTSQVPLYFRKCFRQHKLAYSF 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00041 708 MobiDBLite consensus disorder prediction 261 493 - -
Gma19g00041 708 MobiDBLite consensus disorder prediction 397 428 - -
Gma19g00041 708 MobiDBLite consensus disorder prediction 42 67 - -
Gma19g00041 708 MobiDBLite consensus disorder prediction 305 359 - -
Gma19g00041 708 Coils Coil 200 220 - -
Gma19g00041 708 MobiDBLite consensus disorder prediction 271 304 - -
Gma19g00041 708 MobiDBLite consensus disorder prediction 437 451 - -
Gma19g00041 708 MobiDBLite consensus disorder prediction 39 75 - -
Gma19g00041 708 Pfam TCP-1/cpn60 chaperonin family 537 643 IPR002423 GO:0005524
Gma19g00041 708 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 574 - -
Gma19g00041 708 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 574 - -
Gma19g00041 708 SUPERFAMILY GroEL apical domain-like 517 644 IPR027409 -
Gma19g00041 708 MobiDBLite consensus disorder prediction 360 381 - -
Gma19g00041 708 Pfam UBA-like domain (DUF1421) 523 567 IPR010820 -
Gma19g00041 708 Gene3D GroEL 517 641 IPR027409 -
Gma19g00041 708 MobiDBLite consensus disorder prediction 471 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00041 Gma-Chr19 321164 337516 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00041 146 566 Trihelix Transcription Factor Family AT3G01560 45.794 1.65e-68 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00041 - - gmx:100778494 901.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g00041 19 321164 337516 Gma19g00041 19 321164 337516 ECH