Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00027 ATGGCTTGGGAAGCAAGTAGCCACAGAGGTGGTAATAAGGTAATTTACCACAGTGTCTCTGTTTCGCTCGGTTTTCGGGGTGACAAGACAGCTTCTGTTTCGCAAAGGTTCAGAGTTTTCAGTCAATGGTGGGTGGGTGCTTCCAGATTCGGACTCAAAGAGTTTCTTTTCTTTCGCGCTCTCAACCAACACATTACTAGGAGCTGGCTTATTGACATTAGAGGATTTGCAAAGAAAGTGAAAGATACTACTCTGTCAACAGATGATCAAATGAAGGACTGTGGAACATACAGCGAATGCCCGAAATGTCATTATCATATTGATAACAGTAATGTTTCTCATGAGTGGCCTGGCTTTCCTGTTGGTGTAAAGTTTGATCCTTCTGATGTTGAGCTTTTAGAGCATTTAGCAGCAAAGTGCTGTATTGGAAACAGAGAGCCACACATGTTTATTCATCAGTTCATCCCAACTCTAGAAGGAGAGCAAGGTATTTGCTACACTCATCCACAAAATCTTCCAGGTGCTAAGACGGATGGGAGTAGTGTCCATTTCTTTCACAAAACAGCTAATGCATATGCTACTGGACGAAGGAAGCGTCGAAAGATTCATCATCAAGATGGTTTGACTGAGGAGCATGTACGCTGGCACAAGACTGGTAGGACCAAAGCTGTGACAGAAGATGGAGTGCATAAGGGTTTTAAGAAGATCATGGTTCTTTATATAAGATCTAAGAAAGGGACCAAGCCATATAAAACCAATTGGGTGATGCATCAGTACCATCTAGGGAGTGAAGTTGAGAAGGATGGTGAATATGTGGTTTCAAAAATATTTTATCAACAGCATAAGCAGAATGAGAAGAATGAGGAGAATACAATGGTTGAAGATTCTAACGTAGCAGCACAAGCAGGTCCAAGAACCCCAAAACCAAATCCCCCTACTCGACCTTGTACAGCCAAATGTGATGACAATTTTGATGAAAATGAACTTCTGCCATTCATCCAGGATGCCAGGCCTATACCTGGAGAATCACATGCACCACCATCTAATGTTCAAGATGAGGACCCTGCATGGTTGGCTGGTGAATCACAAGCTGACTGTGACTTCGATGGCTTGGAAGACATATTATTATGCAAGGAGATTTTACAATCATCTGCTCTCCTAAATCATTCTGGATTGACCTCCACTTTTAATGGCGATGCAAAGGCGAACAAGTTGGTTGCACCTGGAAACAATAATGATTATGGATCTTATGGAGTTTCTGTCCTGGACACACTGGAATTGGATACTCCTCCAGACTTTGATCTTTCTAATTTACAATTTGGTTCTCAAGACAGCACCCTTCAGTGGATTGACACACCATAA 1362 0.4222 MAWEASSHRGGNKVIYHSVSVSLGFRGDKTASVSQRFRVFSQWWVGASRFGLKEFLFFRALNQHITRSWLIDIRGFAKKVKDTTLSTDDQMKDCGTYSECPKCHYHIDNSNVSHEWPGFPVGVKFDPSDVELLEHLAAKCCIGNREPHMFIHQFIPTLEGEQGICYTHPQNLPGAKTDGSSVHFFHKTANAYATGRRKRRKIHHQDGLTEEHVRWHKTGRTKAVTEDGVHKGFKKIMVLYIRSKKGTKPYKTNWVMHQYHLGSEVEKDGEYVVSKIFYQQHKQNEKNEENTMVEDSNVAAQAGPRTPKPNPPTRPCTAKCDDNFDENELLPFIQDARPIPGESHAPPSNVQDEDPAWLAGESQADCDFDGLEDILLCKEILQSSALLNHSGLTSTFNGDAKANKLVAPGNNNDYGSYGVSVLDTLELDTPPDFDLSNLQFGSQDSTLQWIDTP 453
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00027 453 Gene3D NAC domain 128 284 IPR036093 GO:0003677|GO:0006355
Gma19g00027 453 PANTHER NAC DOMAIN CONTAINING PROTEIN 44-RELATED 66 451 - -
Gma19g00027 453 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 66 451 IPR044799 GO:0003700
Gma19g00027 453 SUPERFAMILY NAC domain 103 279 IPR036093 GO:0003677|GO:0006355
Gma19g00027 453 Pfam No apical meristem (NAM) protein 120 261 IPR003441 GO:0003677|GO:0006355
Gma19g00027 453 ProSiteProfiles NAC domain profile. 119 279 IPR003441 GO:0003677|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma19g00027 Gma-Chr19 193589 198071 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00027 100 279 NAC Transcription Factor Family AT1G28470 55.376 2.33e-60 198
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma19g00027 NAM 2.6e-20 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00027 - - gmx:100782779 812.757
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g00027 19 193589 198071 Gma19g00027 19 193589 198071 ECH