Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00026 ATGTGTTGGGAAAAGTTGCCTTTGGAGTGTGCAAAAGTCGAGCCTTTTTCTCTTGTCAAACTCACAAGGGGTTATAACTTCTTCCATGATGTCATGCAACGGATTCATAATTCATTCCAatataaaaatcagaatgttgctgttaagattatcaacaagggagaaactccggaagagatttcaaggagagaggctcggtttgccagagaggttgctatgttgtcgagagttcaacacaaaaatctggttaagTTTATTAGGGCCTGCAAAGAACCTGTTATGGTTATAGTTACTGAACTTCAATTAGGTGGGACATTGCGCAAATATCTCTTGAATATGCGTCCAAAGTGCTTGGATATGCCTGTGGCTGTTGGATTTGCTCTTGATATTGCCCGAGCAATGGAATGTTTACACTCTCATGGGATCATTCACCGCGATCTTAAACCCGATAACTTGATCTTGACAGACGATCATAAGACAATGATGACTGCTGAAATGGGAACATATCGTTGGATGGCTCCAGAACTTTACAGCACTGTTACTCTAAGACAAGGTGAGAAGAAGCATTACAACCACAAGGTGGATGCCTACAGCTTTGCAATTGTGTTGTGGGAACTCATCCATAATAAGTTGCCCTTTGAAGGCATGTCTAATCTACAGGCAGCATATGCAGCTGCTTTTAAGAATACAAGGCCCAGTGCTGAAGACCTTCCTGAGGAATTAGCTCTTATTGTAACTTCATGTTGGAAAGAGGAACCGAATGATCGACCAAATTTCAGTCAAATCATACAGATGCTCCTTCAATATCTCTCCACCATTTCACCACCAGAGCCGGTTGTTCCTCTGCAGATTACTTCATCTGAGAATGCGGTGTTGCCACCAGAATCTCCCGGTACAAGTGCATTAATGCTTGGAAGAGATGACTCTAGAGAAACCAAAGGGTCTTTCTTCTGCTTTTAA 960 0.3656 MCWEKLPLECAKVEPFSLVKLTRGYNFFHDVMQRIHNSFQYKNQNVAVKIINKGETPEEISRREARFAREVAMLSRVQHKNLVKFIRACKEPVMVIVTELQLGGTLRKYLLNMRPKCLDMPVAVGFALDIARAMECLHSHGIIHRDLKPDNLILTDDHKTMMTAEMGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELIHNKLPFEGMSNLQAAYAAAFKNTRPSAEDLPEELALIVTSCWKEEPNDRPNFSQIIQMLLQYLSTISPPEPVVPLQITSSENAVLPPESPGTSALMLGRDDSRETKGSFFCF 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00026 319 Pfam Protein kinase domain 42 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00026 319 CDD STKc_MAP3K-like 41 266 - -
Gma19g00026 319 PANTHER PROTEIN KINASE ATN1 40 305 - -
Gma19g00026 319 SUPERFAMILY Protein kinase-like (PK-like) 41 290 IPR011009 -
Gma19g00026 319 SMART serkin_6 5 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00026 319 ProSiteProfiles Protein kinase domain profile. 17 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00026 319 Gene3D Transferase(Phosphotransferase) domain 1 103 277 - -
Gma19g00026 319 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Gma19g00026 319 Gene3D Phosphorylase Kinase; domain 1 34 101 - -
Gma19g00026 319 PANTHER SERINE-THREONINE PROTEIN KINASE 40 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00026 Gma-Chr19 187417 190668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00026 40 319 MAP Kinase Kinase Kinase AT5G50180 70.820 1.04e-158 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Gma19g00026 Pkinase 3.2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00026 - - gmx:100792887 521.161