Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00020 ATGTCTTCTTCCTCTAGTACTAGTAGATGGACGGTTCAGGAAAACAAAGCGTTTGAAAGAGCTCTAGCAGTTTATGACAAGGACACTCCAAACCGTTGGTGCAACATTGCAAGGGCTGTTGGTGGAAAAACTCCAGAGGAAGTGAGGAGGCACTATGATCGTCTTGTGGAGGACATTAGGCGTATTGAGTCTGGCCAAGTTCCCTTTCCAATTTACAGGAACCTCCAAGATGGGGCATGA 240 0.4667 MSSSSSTSRWTVQENKAFERALAVYDKDTPNRWCNIARAVGGKTPEEVRRHYDRLVEDIRRIESGQVPFPIYRNLQDGA 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00020 79 CDD SANT 9 56 IPR001005 -
Gma19g00020 79 SMART sant 6 58 IPR001005 -
Gma19g00020 79 Pfam Myb-like DNA-binding domain 7 53 IPR001005 -
Gma19g00020 79 ProSiteProfiles Myb-like domain profile. 2 56 IPR001005 -
Gma19g00020 79 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 2 75 - -
Gma19g00020 79 SUPERFAMILY Homeodomain-like 8 64 IPR009057 -
Gma19g00020 79 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 75 IPR044636 GO:0003700
Gma19g00020 79 Gene3D - 1 69 - -
Gma19g00020 79 ProSiteProfiles SANT domain profile. 5 60 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00020 Gma-Chr19 146331 146570 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma19g00020 Myb_DNA-binding 3.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00020 - - gmx:100784910 162.155