Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00013 ATGGCATTGCCGGTTATGCCCCGGAAAGGCATATATAATGATTTGAACATTAGATTTGAGGCGCGGCGCACCATCGCATCGATGCCTGCAAGTGCTGCTGTAGCAGATTCCAAGAAAAAAGAACAGGCCCTTGCCTACAAGACCCACCTGTATGCACTGCCTGGAATACACCAACCTTTGTTGTTGTTCTTGACAACCTTCGCTACATTTGCTTCCCAAGCCAAAGGCGTCTGTTGTGATTTTTCTGTCTTTGGAACTTTTCTTGTTCAAGTCGTCATCATGGCCTTGCAGAACATTGGTGCTGGAAATAGTGATGATGCCTTCTATCGGTATAAGATGCCTAAAATGATTACCAAGATCGAGGGTAGAGGAAATGGCATCAAAACAAATATTGTCAACATGGTTGACATTGCCAAGGCATTGGCAAGGCCACCCTCTTACACAACCAAGTACTTTGGTTGTGAACTTGGGGCCCAGTCTAAGTTTGATGAGAAAGTTGGGACTTCTCATGTTAATGGGTCACATGACACCCCAAAACTTGCTGGTCTTCTTGAGATCTTTATCAAGAAATATGTCCAGTGTTATGGTTGTGGAAACCCTGAAACTGAGATATTGATTACTAAGAACCAAATGATCCAGCTGAAATGCGCTGCTTGTGGTTTTGTGTCAGATGTGGATATGAGAGACAAGCTGACTAGCTTTATTATAAAAAACCCTCCTGAAACAAAGAAAGGATCCAAAGACAAGAAGGCCATGAGGAGAGCCGAGAAGGAGAGACTGAAGGAAGGTGCAGCAGCTGATGAGGAACAAAAGAAAATGAAGAAAGAGACTAAGAAGAAAAGCTTATCTTCCACTTCCAAGGATGAGACCACAAAGTCAAACTCTACAAAGAAGAAAGCCAGTGGCTCTGATGAAGATTGTCGATCTCCAGATCACAGTCAAGTTGATGATGAGAAAGAAGAGGCACCTGATGAAGATGATGATGGTGAAGTACAATGGCTAACAGATACGTCATTAGAGGCTGCTCGGCAACGTATCCAAGAGCAGCTAAGTGCCGTAACAGCTGATATGGTCATGCTCTCCACAGATGAGCCAGAGAAGAAGGAAACAGCATCAAGTAAGAAAAGTGATGGTTCTGAAAATGGTAACACGATGCACTACAAGAAACTGGTTGGAGAAGTGAAAGCAATCTTGAACAAAGGTGTTGTGGCGAGTGAATTGCAGTCCCAAATGGAAGCAATTCCATCACCAGCTCAAGAAAAGATCAGTGCTCTGATTGAGGCCTTATTTGAGGGCATTGAGAAAGGGTTTGCAAAAGAGGTGGTCAAGAAGAAGCGCTACTTTGATGCTGCAGTTTCCATGGGGGAGGGATCACATTTGCTATTGCTTCGTGCAATTGAGGCTTTCTGTCTAAAGTCCACTTCCAATGCTTTGAAGGAAATTGCCATTGTTTTGAAGGCACTGTATGATGCTGATCTGTTGGAGGAAGAGCACATAGTGCAGTGGTATCAAGAAGGGCTTAAGGGTGACAACAAGCACTCTCAGATATGGAAGAATACCAAACCTTTGATTGAATGGCTTCAAAGTGCAGAATCAGAAACAGAGGAAGAATAA 1614 0.4356 MALPVMPRKGIYNDLNIRFEARRTIASMPASAAVADSKKKEQALAYKTHLYALPGIHQPLLLFLTTFATFASQAKGVCCDFSVFGTFLVQVVIMALQNIGAGNSDDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPPSYTTKYFGCELGAQSKFDEKVGTSHVNGSHDTPKLAGLLEIFIKKYVQCYGCGNPETEILITKNQMIQLKCAACGFVSDVDMRDKLTSFIIKNPPETKKGSKDKKAMRRAEKERLKEGAAADEEQKKMKKETKKKSLSSTSKDETTKSNSTKKKASGSDEDCRSPDHSQVDDEKEEAPDEDDDGEVQWLTDTSLEAARQRIQEQLSAVTADMVMLSTDEPEKKETASSKKSDGSENGNTMHYKKLVGEVKAILNKGVVASELQSQMEAIPSPAQEKISALIEALFEGIEKGFAKEVVKKKRYFDAAVSMGEGSHLLLLRAIEAFCLKSTSNALKEIAIVLKALYDADLLEEEHIVQWYQEGLKGDNKHSQIWKNTKPLIEWLQSAESETEEE 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00013 537 SMART eIF2Bneu4 108 222 IPR002735 GO:0003743|GO:0006413
Gma19g00013 537 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 94 537 IPR045196 GO:0003743|GO:0006413
Gma19g00013 537 Gene3D - 198 238 - -
Gma19g00013 537 SMART 542_3 445 533 IPR003307 GO:0005515
Gma19g00013 537 Pfam Domain found in IF2B/IF5 104 220 IPR002735 GO:0003743|GO:0006413
Gma19g00013 537 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 103 194 IPR016189 GO:0003743|GO:0006413
Gma19g00013 537 ProSiteProfiles W2 domain profile. 380 537 IPR003307 GO:0005515
Gma19g00013 537 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE 94 537 - -
Gma19g00013 537 Gene3D - 381 528 - -
Gma19g00013 537 CDD W2_eIF5 420 535 - -
Gma19g00013 537 MobiDBLite consensus disorder prediction 241 317 - -
Gma19g00013 537 Pfam eIF4-gamma/eIF5/eIF2-epsilon 460 537 IPR003307 GO:0005515
Gma19g00013 537 MobiDBLite consensus disorder prediction 236 331 - -
Gma19g00013 537 MobiDBLite consensus disorder prediction 362 384 - -
Gma19g00013 537 Gene3D - 93 197 - -
Gma19g00013 537 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 191 226 IPR016190 GO:0003743|GO:0006413
Gma19g00013 537 SUPERFAMILY ARM repeat 389 531 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00013 Gma-Chr19 97732 99736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00013 94 530 Eukaryotic Initiation Factors Gene Family AT1G77840 61.435 9.76e-175 498