Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02647 ATGGCTTCCCTGCTTATTCACCTCCCTCCTATCCCTATTCTTCAACACTTTATCCTCCTCCTCATACTGATTCAGACACCTCCATATTTAAGCTCCTACAATGATGATAGGGGTTGTACTAATCAGCTGATAAGTTGTGGGAATATAAAAAACATTGGTTTTCCATTCTGGGGAGAAAAACGACCAAGAGATTGTGGCCACCCTCGGATGCAACTCAGCTGCGAACAGGAGATCACCTACATAAACATTAATGATTTCAGGTACAAGGTTTTGGAGGTAAACCCAGATAACCATACTTTGAGAATCACTAGAGAGGACTACTTGGAAGGCATATGCCAACCAAAGTTTGTCACCACCAGCCTTGACACTGAGCTCTATGTCCATGACTCAGCCTATAAGAATCTTACCCTTTTCTATTGTGCTAATGATTTGCCTTCCACCACTGGATTTCTGCCTAGTTGTGTCCCAAATGGCAATTATGTTTATCCTCGATTTGAGCCTCTGCCTCCTCCTAATTATTATGCCTCTTGCAAAACAGTGGTTGTTCCAGTTCCTCCGTCCTTAGTTGATACTAGTGATGCTGACAAAATACACAATGCAATCATAGACGGATTTGTGGTGAGATGGATAGTGGGCATTGGAGAATGTGAGAAGTGTATGATATCAGCAGGTAGAGTATGCGGCGGTATTGAATGGTATCCAAATCAAACATGTTACTGCAGAGATGGACCTTGTTCTAATTTCTTACCAGATGACAAAGCACCGCAGTCCCCACCTACAGGTACTTCTAAGTTCATTGATTATTACTTTTTCTGCGCTAGTATAGGAGCAGTTGTAGCCCTTGTTGTCATTCTTGGATGTGTGTACTTTGTGATGCAAAGAAGGAGAAAAACTGCTTATAATAAACAAAGAAGCATGGAACTGTTCATTGCTCCTTCAAGCGGAGACACTTTTGCATCTACAACTAACACGTCTCAAAGTCTATCTTCTTACCAATCCTCCAACACTGATCCAATGCCGCCGAGGAGTTACTACTTTGGCGTCCAGGTCTTTACCTATGAGGAACTAGAGGAAGCTACCAAAAACTTTGACTCTTCAAGAGAACTTGGTGAGGGAGGTTTTGGCACTGTTTACAAAGGTCAACTCAAAGATGGACGTGTAGTTGCAGTGAAACGTCATTATGAAAGCAACTCTAGACGTATTGAGCAGTTCATGAATGAAGTTCAGATTCTAGCACGGTTAAGGCACAAGAGCCTGGTGACACTCTTTGGATGCACCTCTAGACATAGCAGAGAGCTTCTCCTTGTGTATGAATTCATACCCAATGGAACAGTGGCTGATCATCTTCAAGGAAGGAGCTCAAACTCAACTAATTTACTCCCTTGGCCTGTAAGATTGAACATTGCAGTTGAAACAGCTGAGGCTCTAGCCTACCTACATGCTAATGATGtcatacaccgcgatgttaaaaccaacaacattctcctggatgataacttccgtgtcaaggttgctgatttcggtctctcaagggatttcccaaaccatgtcactcatgtgtcaacagctccacagggaacaccaggttatgttgaccctgagtactatcagtgctaccaactcactgataagagtgatgtttatagctttggagtggtcttagttgagCTGATATCATCATTGCAAGCTGTGGACATCAACAGGAACCGCAGTGATGTGAACTTGGCAAACATGGCTATCAATAAAATTCAGAACCAGGAACTGCATGAGTTGGTTGATCCTTATCTTGGATTTGAGAGGGATTATGCTATAAGGAGGATGACAACAGGGGTGGCAGAATTGGCCTTTAGGTGTTTGCAGCAGGAAAGAGAGATCAGACCCTCCATGAATGAGGTGGTGGAGATCTTGAGAGGAATCAAGAGTGACGATGGGCTTGGTGCAAGGGAAGAGACAGAAGTATTGGAAGTTAGGATAGATGAAGCTAGACTTCTGAAGAAGGTTTCCCCGGTTTCACCAGATTCAGTTGTTGATAAATGCTTTAGCGGCTCCTCTGTATCTAATTCCTCATAG 2070 0.385 MASLLIHLPPIPILQHFILLLILIQTPPYLSSYNDDRGCTNQLISCGNIKNIGFPFWGEKRPRDCGHPRMQLSCEQEITYININDFRYKVLEVNPDNHTLRITREDYLEGICQPKFVTTSLDTELYVHDSAYKNLTLFYCANDLPSTTGFLPSCVPNGNYVYPRFEPLPPPNYYASCKTVVVPVPPSLVDTSDADKIHNAIIDGFVVRWIVGIGECEKCMISAGRVCGGIEWYPNQTCYCRDGPCSNFLPDDKAPQSPPTGTSKFIDYYFFCASIGAVVALVVILGCVYFVMQRRRKTAYNKQRSMELFIAPSSGDTFASTTNTSQSLSSYQSSNTDPMPPRSYYFGVQVFTYEELEEATKNFDSSRELGEGGFGTVYKGQLKDGRVVAVKRHYESNSRRIEQFMNEVQILARLRHKSLVTLFGCTSRHSRELLLVYEFIPNGTVADHLQGRSSNSTNLLPWPVRLNIAVETAEALAYLHANDVIHRDVKTNNILLDDNFRVKVADFGLSRDFPNHVTHVSTAPQGTPGYVDPEYYQCYQLTDKSDVYSFGVVLVELISSLQAVDINRNRSDVNLANMAINKIQNQELHELVDPYLGFERDYAIRRMTTGVAELAFRCLQQEREIRPSMNEVVEILRGIKSDDGLGAREETEVLEVRIDEARLLKKVSPVSPDSVVDKCFSGSSVSNSS 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02647 689 Pfam Wall-associated receptor kinase C-terminal 174 243 IPR032872 -
Gma18g02647 689 ProSitePatterns Protein kinases ATP-binding region signature. 369 391 IPR017441 GO:0005524
Gma18g02647 689 Gene3D Transferase(Phosphotransferase) domain 1 440 661 - -
Gma18g02647 689 SMART serkin_6 363 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02647 689 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 13 689 - -
Gma18g02647 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 484 496 IPR008271 GO:0004672|GO:0006468
Gma18g02647 689 Gene3D Phosphorylase Kinase; domain 1 338 439 - -
Gma18g02647 689 SUPERFAMILY Protein kinase-like (PK-like) 342 640 IPR011009 -
Gma18g02647 689 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 13 689 IPR044652 -
Gma18g02647 689 Pfam Protein tyrosine and serine/threonine kinase 366 636 IPR001245 GO:0004672|GO:0006468
Gma18g02647 689 ProSiteProfiles Protein kinase domain profile. 363 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02647 689 Pfam Wall-associated receptor kinase galacturonan-binding 39 103 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02647 Gma-Chr18 60539617 60551559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02647 38 689 Receptor kinase-like Gene Family AT1G25390 42.560 1.96e-146 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gma18g02647 Pkinase 1.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02647 - - gmx:100811407 892.878