Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02646 ATGAAACAACTGCTTCTTGAGCCTTGTTTCATCTTCATCTTGTTGGTAATCTCAATTACCAACACTCCAACTTGCCTTTGCGAAGATGATGCTCGCTACGCCAACTGTAGAAACGCAATTAGCTGCGGAAATAACAACTTCAACCTCAAATACCCATTCTGGGGAGAAGACAGAGGTAGCATTTGTGGTGGACCTAACTACGAGTCGGAGGAACTCACATGTGAAGGTCAAGTCCCCAAGATAACCATAAATTTCATCAGATACCGTGTTCTTGGCTGGGAAAACACATCACAGATTCTCAAAGTCGCAAGGGACGACTACTGGGACAATAATACTGTCTGTGTCAATGGTGACAGGAACATCACATTTGATAACACTCAGTTTCAATATGATTATGATGGCCTTGTTAACGTTACGCTCTTTTATGATTGCCCTGCCAGTTCTCCAACTCCCACTAATTCATTGCTTCCACCATCGTCTGTGTTTAGTTTTTCCTGTGGTGGTGCTTCAGTTGTCTACTACACAGTCCAACCTTTACCTTCCTCGTACGAGGCGCCCTGCAAGATTGTTGTGATTCCAATCTTTCAAACCAACAACGATTCACTTGACACTCCCGATAGAATCATTGAAGCTTTACAGGGCGGTTTTCAGATTGAATGGACGGGAAATTATGAGGAGTGCGAGAAATGCACTGGTTCTGGTGGAGAGTGTGGATTTGATGGAAATAATTTCCAATGTTTCTGCAAGGATGGACCTTATTCTGCTTCATGCAAAGAAAAAAGTAAAGTCCAGTTGCCAACAATGATCTTTATTATTGTACCCACGATTATTTCAGTAGCACTATTCTTTTTTTGCTACTACATGGTAAAGAGAAAATCAAGCCTGGACCATTTCCGCTTTCCAAAATATTGGGTGTTCACaccaaaaaagagtatcaagagtgttcttaaagaaaattttggaaatgaaagtgccacattagagcccttgcaattcaatctgtctatacttaaagccgcaaccaataatttttcagatgagaataggattggcaaaggtggatttggagaagtttataagggaattcttcatgatgggcgacaaattgcaataaaaaaactttcaaaaagttctatgcaaggttccaatgagttcaagaatgaagttttagtgatagccaagcttcaacatagaaatcttgtgacacttattgggttttgtcttgaagaacaaaataaaatacttatatacaaatatgtgccaaacaagagtcttgactattttttatttgattctcaacggccaaagttaagctggtttcaacgttataatattataggaggaattgctcaaggaattctttatttgcatgaattttctacacttaaagttatacatcgtgatcttaaacctagtaatgttttattagatgaaaatatggttccaaaaatatcagactttggtctagctagaattattgaaataaatcaagatcaaggaggtacaaatagaatcgttggaacatttggatatatgcctccggaatatgcaatgtttggacaattttcagataaattagatgtttttagttttggagtcatgattctagagattattactggaaaaaagaatttgagttcttacgaaccacatcgtgttgctgatggccttttgagttatgtttggagacaatggagggaagaaacgttgttaggcgtattagactcaagtattaaagacaattattcggagatcgaagttattaggtgcattcacattggtttattatgtgttcaacaaaatccagatgttagacctacaatggcaacaattgtttcgtatcttagtagttatttaattgatttgccgactcctcaagaacctgcatttttcttgcatgaaagaattcatccaatatcattggcacaagaatcaggttgcaatcaatctgccaataggtctatcccattctctgttaataaaatgtctataagtgattttattcctcgatag 2013 0.1923 MKQLLLEPCFIFILLVISITNTPTCLCEDDARYANCRNAISCGNNNFNLKYPFWGEDRGSICGGPNYESEELTCEGQVPKITINFIRYRVLGWENTSQILKVARDDYWDNNTVCVNGDRNITFDNTQFQYDYDGLVNVTLFYDCPASSPTPTNSLLPPSSVFSFSCGGASVVYYTVQPLPSSYEAPCKIVVIPIFQTNNDSLDTPDRIIEALQGGFQIEWTGNYEECEKCTGSGGECGFDGNNFQCFCKDGPYSASCKEKSKVQLPTMIFIIVPTIISVALFFFCYYMVKRKSSLDHFRFPKYWVFTPKKSIKSVLKENFGNESATLEPLQFNLSILKAATNNFSDENRIGKGGFGEVYKGILHDGRQIAIKKLSKSSMQGSNEFKNEVLVIAKLQHRNLVTLIGFCLEEQNKILIYKYVPNKSLDYFLFDSQRPKLSWFQRYNIIGGIAQGILYLHEFSTLKVIHRDLKPSNVLLDENMVPKISDFGLARIIEINQDQGGTNRIVGTFGYMPPEYAMFGQFSDKLDVFSFGVMILEIITGKKNLSSYEPHRVADGLLSYVWRQWREETLLGVLDSSIKDNYSEIEVIRCIHIGLLCVQQNPDVRPTMATIVSYLSSYLIDLPTPQEPAFFLHERIHPISLAQESGCNQSANRSIPFSVNKMSISDFIPR 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02646 670 Gene3D Transferase(Phosphotransferase) domain 1 420 622 - -
Gma18g02646 670 ProSiteProfiles Protein kinase domain profile. 344 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02646 670 CDD STKc_IRAK 350 615 - -
Gma18g02646 670 SMART serkin_6 344 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02646 670 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 245 661 - -
Gma18g02646 670 SUPERFAMILY Protein kinase-like (PK-like) 327 637 IPR011009 -
Gma18g02646 670 ProSitePatterns Protein kinases ATP-binding region signature. 350 373 IPR017441 GO:0005524
Gma18g02646 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Gma18g02646 670 Pfam Wall-associated receptor kinase C-terminal 184 251 IPR032872 -
Gma18g02646 670 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 245 661 - -
Gma18g02646 670 Gene3D Phosphorylase Kinase; domain 1 308 419 - -
Gma18g02646 670 Pfam Protein kinase domain 345 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02646 Gma-Chr18 60533530 60537569 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02646 315 670 Receptor kinase-like Gene Family AT4G11480 51.253 5.14e-126 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma18g02646 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02646 - - gmx:100810864 1363.21