Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02628 ATGATGCGCATTAGTTCCCTACACATATTTGTTGTGTATTTTGCAAACTTACAAAAATATCTTTTTCTTTTAACCCAGAACAGAAGGCACAGCGCCGCCTCATCTCTTCTGCTCTCTCATTACGCTCTTTCCTCCGATCTCAGGTGTTGTTTAAGCTTCCTGTGTTGGCTTGGTATCCTTGCAAGTTCTTCTGTAGCAGATTCCAAGAACATTGGTGCTGCAAACAGTGATGATGCCTTCTACAGGTATAAGATGCCTAGGATGATTACCAAAATTGAGGGCAGAGGTAATGGCATCAAAACTAATGTTGTCAATATGGTTGACATTGCAAAGGCACTGGCAAGGCCTGCGTCTTACACGACCAAGTATTTTGGTTGTGAGCTTGGGGCCCAGTCGAAATTTGATGAGAAGACCGGCACTTCTCACGTCAATGGAGCACACGATACTGCTAAGCTTGCTGGCCTTCTTGAGAACTTCATTAAGAAATATGTCCAGTGTTATGGTTGTGGAAATCCTGAAACTGAGATCATAATTACTAAGAATCAAATGATCCAGCTGAAATGCGCAGCTTGTGGTTTTGTGTCTGATGTTGATATGAGAGACAAGCTGACTACCTTCATCATTAAGAACCCTCCAGAAGTTAAGAAAGGATCCAAAGACAAGAAGGCCATGAGGAGAGCTGAGAAGGAGAGACTGAAGGAAGGTGAATTAGCTGATGAGGAACAGAAGAAAGTGAAGAAAGAGGTTAAGAAGAAAGGCTCTTCATCTTCTAAGGATGGCACTAAATCCACCTCTTCAAAGAAGAAAGCAAGTGGCTCTGATGAAGACCGCACTTCACCTACTCACAGTCAAATTGATGAGAAAGAGGAGGCTCTAGATGAGGATGATGACGATGATGTGCAATGGCAGACAGATACGTCACTTGATGCTGCTCGTCAACGTATCCAAGAACAATTAAGTGCTGTGACAGCTGATATGGTTATGCTTTCTACAGATGAACCAGAGAAGAAAAAAGAAGCAAGTAATGGAAATGATGGTTCTCAGAATGGTAACTCAATGCACTGCAGGACCTTGGTTGGTGAAGTGAAAGCAAATTTGAAGAAAGGTGTTGGAGCAAATGAATTGCTGTCGCAACTTGCAGCACATCCTGTACCTGCTCAAGAAAAGATGAGTGCTCTGGTTGAAGCTTTGTTCGAGGGAACTGAGAAAGGTTTTGCTAAAGAAGCTGATAAAAAGAAGAACTACTTTTCTGTTGCTGTTGCGGATGAGGGATCCCAGCCGTTGTTGCTTCATGCTATTGAAGAGTTTTCTTGCAAGTCTACTTCAAATGCTTTGAAGGAGGTTGCCCTGGTTCTAAAGGCACTCTACGATGCTGATGTGTTAGAGGAAGAACACATAGTGCAGTGGTATCAAAAGGGACTGAAGGGTGATAACAAGAACTCTAGGATTTGGAAGAATGCTCAACCTTTCATTGATTGGCTTCAGAATGCAGAATCAGAAACCGAGGAAGAATAA 1515 0.4264 MMRISSLHIFVVYFANLQKYLFLLTQNRRHSAASSLLLSHYALSSDLRCCLSFLCWLGILASSSVADSKNIGAANSDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKNQMIQLKCAACGFVSDVDMRDKLTTFIIKNPPEVKKGSKDKKAMRRAEKERLKEGELADEEQKKVKKEVKKKGSSSSKDGTKSTSSKKKASGSDEDRTSPTHSQIDEKEEALDEDDDDDVQWQTDTSLDAARQRIQEQLSAVTADMVMLSTDEPEKKKEASNGNDGSQNGNSMHCRTLVGEVKANLKKGVGANELLSQLAAHPVPAQEKMSALVEALFEGTEKGFAKEADKKKNYFSVAVADEGSQPLLLHAIEEFSCKSTSNALKEVALVLKALYDADVLEEEHIVQWYQKGLKGDNKNSRIWKNAQPFIDWLQNAESETEEE 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02628 504 MobiDBLite consensus disorder prediction 213 288 - -
Gma18g02628 504 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-1-RELATED 69 504 - -
Gma18g02628 504 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 163 198 IPR016190 GO:0003743|GO:0006413
Gma18g02628 504 Gene3D - 353 495 - -
Gma18g02628 504 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 69 504 IPR045196 GO:0003743|GO:0006413
Gma18g02628 504 ProSiteProfiles W2 domain profile. 345 504 IPR003307 GO:0005515
Gma18g02628 504 MobiDBLite consensus disorder prediction 212 300 - -
Gma18g02628 504 SUPERFAMILY ARM repeat 357 498 IPR016024 -
Gma18g02628 504 SMART 542_3 413 500 IPR003307 GO:0005515
Gma18g02628 504 Gene3D - 62 169 - -
Gma18g02628 504 Gene3D - 170 210 - -
Gma18g02628 504 SMART eIF2Bneu4 80 194 IPR002735 GO:0003743|GO:0006413
Gma18g02628 504 Pfam Domain found in IF2B/IF5 76 192 IPR002735 GO:0003743|GO:0006413
Gma18g02628 504 Pfam eIF4-gamma/eIF5/eIF2-epsilon 428 504 IPR003307 GO:0005515
Gma18g02628 504 MobiDBLite consensus disorder prediction 332 353 - -
Gma18g02628 504 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 76 166 IPR016189 GO:0003743|GO:0006413
Gma18g02628 504 CDD W2_eIF5 388 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02628 Gma-Chr18 60391733 60394262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02628 69 497 Eukaryotic Initiation Factors Gene Family AT1G77840 62.156 6.22e-173 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02628 K03262 - gmx:100796346 783.482