Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02607 atggccggaaaaggagatggtcctgctatcggaatcgatctcggcaccacctactcctgcgtcggagtgtggcagcacgaccgtgtcgaaatcatcgccaatgaccagggtaacagaaccacgccgtcttacgtcgctttcactgattccgagcgtttgatcggtgacgccgccaagaaccaggtcgccatgaaccccgtcaacaccgtcttcgatgctaagcgtttgattggaaggagattttctgatgcctccgttcagagtgacatgaagctatggccatttaaggaattcaagaggaagcacaagaaggacatcaatggaaaccctagggcTCTTAGGAGGTTGAGGACTGCCTGTGAAAGGGCGAAGAGGACCCTATCATCTACTGCACAAACCACAATTGAGATAGATTCTCTTTATGAGGGTGTTGACTTCTACACCACAATCACCCGTGCCAGGTTTGAGGAGCTCAACATGGATCTCTTCAGGAAGTGTATGGAGCCCGTTGAGAAGTGTTTGAGGGATGCTAAGATGGACAAGAGCACTGTCCATGACGTTGTCCTTGTTGGTGGATCCACTAGAATTCCTAAAGTGCAGCAATTGTTGCAGGATTTCTTCAATGGCAAGGAGCTTTGCAAGAGCATTAACCCCGATGAGGCCGTTGCTTATGGAGCAGCTGTACAGGCTGCTATTTTGAGTGGTGAGGGCAACGAGAAGGTGCAGGATTTGCTGTTGTTGGATGTTACACCCCTTTCTCTTGGTTTGGAAACTGCCGGCGGCGTCATGACTGTTCTCATTCCCAGGAACACGACTATTCCCACCAAGAAGGAGCAAGTGTTCTCTACTTACTCAGACAACCAACCTGGTGTCTTGATTCAGGTGTATGAGGGAGAGAGAGCTAGAACCAGGGACAACAACTTGTTGGGTAAATTTGAGCTTTCTGGCATTCCCCCAGCACCCAGGGGTGTTCCTCAGATTACTGTCTGCTTTGATATCGATGCCAATGGTATCTTGAATGTCTCTGCCGAGGACAAGACCACAGGGCAGAAGAACAAGATCACCATCACCAACGACAAGGGTAGACTATCGAAGGATGAGATTGAGAAGATGGTCCAAGAGGCGGAGAAGTACAAGGCCGAGGATGAGGAGCACAAGAAGAAGGTCGACGCAAAGAATGCTTTGGAGAACTATGCCTACAACATGAGGAACACCATTAAGGATGAGAAGATTGCATCAAAGCTTTCTGATGACGACAAGAAGAAAATCGAAGATGCCATCGAGAGTGCTATTCAGTGGTTGGATGGAAACCAGCTAGCGGAGGCTGACGAGTTCGAAGACAAGATGAAGGAGCTTGAGAGCATTTGCAACCCAATCATTGCCAAAATGTACCAGGGTGCAGGTGCTCCCGACATGGCTGGAGGCATGGATGAAGATGTTCCTCCATCTGGATCCGGTGGTGCTGGCCCCAAGATCGAGGAAGTTGATTAA 1491 0.3763 MAGKGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPVNTVFDAKRLIGRRFSDASVQSDMKLWPFKEFKRKHKKDINGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGVDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVDAKNALENYAYNMRNTIKDEKIASKLSDDDKKKIEDAIESAIQWLDGNQLAEADEFEDKMKELESICNPIIAKMYQGAGAPDMAGGMDEDVPPSGSGGAGPKIEEVD 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02607 496 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 239 396 IPR029047 -
Gma18g02607 496 PANTHER HEAT SHOCK PROTEIN 70KDA 96 476 IPR013126 GO:0005524|GO:0140662
Gma18g02607 496 PANTHER HEAT SHOCK PROTEIN 70KDA 1 96 IPR013126 GO:0005524|GO:0140662
Gma18g02607 496 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 390 471 IPR029048 -
Gma18g02607 496 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 96 - -
Gma18g02607 496 PRINTS 70kDa heat shock protein signature 36 48 - -
Gma18g02607 496 PRINTS 70kDa heat shock protein signature 8 21 - -
Gma18g02607 496 PRINTS 70kDa heat shock protein signature 58 66 - -
Gma18g02607 496 SUPERFAMILY Actin-like ATPase domain 93 235 IPR043129 -
Gma18g02607 496 Gene3D - 2 106 - -
Gma18g02607 496 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Gma18g02607 496 Gene3D - 116 218 - -
Gma18g02607 496 Pfam Hsp70 protein 96 465 IPR013126 GO:0005524|GO:0140662
Gma18g02607 496 MobiDBLite consensus disorder prediction 468 496 - -
Gma18g02607 496 SUPERFAMILY Actin-like ATPase domain 8 103 IPR043129 -
Gma18g02607 496 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 238 392 IPR029047 -
Gma18g02607 496 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 96 476 - -
Gma18g02607 496 Gene3D - 393 466 IPR029048 -
Gma18g02607 496 Coils Coil 365 388 - -
Gma18g02607 496 ProSitePatterns Heat shock hsp70 proteins family signature 3. 187 201 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02607 Gma-Chr18 60193338 60196058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02607 1 96 Calmodulin-binding Proteins AT3G12580 91.667 2.03e-55 194