LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma18g02606	ATGGACCAGACGAAAATCAAAGCCTCAAATCAAGACAGCACAAAACCATGGTATGAATCAATCATTGATTTCATTTCTGAATCTTCAATGCAAGAAGATGATGAAGAAGACATTTTAGCTCCTCAACTCCTTTACACCTATGAAACCAGCATGTTTGGTTTTGCTGTCCATCTTTCCAAGAAACACCTCAAATACTTGAACCAAGTGGATGGTTTTCTCTCAGCCATACCTGATGAACTGTCAACCCTCCACACAACATACAGCCCTCACTTTCTTGGCCTAAGGAATGGAAGATCACTTTGGAGTGCTTCTAACTTGGCCACAGATGTGATCATAGGAGTTCTTGATTCGGGAATATGGCCCGAGCACATCAGCTTCCAAGACTCAGGCATGTCCCCAGTGCCTTCTCATTGGAAAGGTGTTTGTGAAAAGGGCACCAAGTTCTCTTCCTCAAATTGCAACAAGAAGCTTATTGGTGCAAGAACCTATTACAAGGGGTATGAAAAATTCTTTGGGAAAAAAATCAATGAAACAGTGGATTATCTTTCTCCAAGAGATTCCGAAGGGCATGGAACACACACTGCCTCAACTGCAGCTGGTAGAGTGGTGAAAAATGCCAACCTTTTTGGCCAGGCTAGAGGTACAGCAAGTGGAATGAGGTATACCTCTAGAATTGCAGTTTATAAAGTATGCTGGTCTTCTGGTTGTACTAATGCCGACGTATTAGCAGCCATGGACCAAGCAGTTTCTGATGGGGTTGATGTATTGTCACTCTCTTTAGGGAGTATTCCCAAACCTTTTTATAGTGATAGCATTGCCATAGCTTCATTTGGGGCAACCAAGAAAGGGGTTTTTGTTGCTTGCTCCGCAGGCAATTCAGGCCCCTTTCCATCGACAGTTGGAAATGGTGCTCCATGGATCACGACAGTTGCTGCTAGCTCCACTGACCGAAGCTTTCCGACAAAAGTAAAACTTGGGAATGGAAAAACCTTCGAAGGGTCATCTTTATATCAAGGTAAGAAGACAAACCAATTGCCCCTTGTCTATGGCAAATCAGCAGGTGCAAAAAAGGAAGCACAGTATTGCATTGGAGGCTCCCTTGATCCAAAGCTTGTCCATGGGAAAATAGTTGCTTGTGAAAGAGGTATAAATGGTAGAACTGAGAAGGGAGAGGAAGTGAAAGTGGCAGGAGGGGCAGGAATGATACTACTCAACAATGAATATCAAGGAGAAGAGCTTTTCGCTGACCCTCATATTTTGCCAGCCACTTCCTTAGGGGCTTCAGCAAGTAAAACTATTAGAAGCTATAGTCAATCTGTTAAAAAACCAACAGCTTCAATTTCCTTTATGGGGACAAGGTTTGGTGACCCTGCACCTGTGATGGCAGCATTTTCTTCAAGAGGACCAAGCCTAGTGGGACCAGATGTAATTAAGCCTGATGTGACTGCACCTGGTGTGAACATCTTGGCTGCTTGGCCAAGCAAAATTAGCCCAAGCTTTCTCATGAGTGACAAAAGAAAAGTACTATTTAACATACTTTCTGGTACTTCAATGTCTTGTCCTCATGTTAGTGGCATAGCAGCACTGCTCAAGTCTTTCCACAAAGATTGGTCCCCTGCAGCCATTAAATCTGCTCTGATGACTACTGCTTACACATTGAACAACAAAGGAGCTCCAATTTCAGACATGGCCTCAGATAACTCACCATTTGCTACCCCCTTTGCATTTGGTTCAGGCCATGTTAACCCTGTAAATGCTTCTGATCCAGGATTAGTCTATGATATCAGCACCAAAGACTACTTAAATTATTTATGCAGCATAAACTATACCTCTTCTCAGATTGCTTTATTATCAAGAGGTAAATTTGTATGTTCTAAAAAAACACTTCTTCAAGCTGGTAACTTGAACTACCCTTCATTTTCTGTTCTATTTGGCAGAAGTGCCTCCAATGCTAGTGTGACATACAGGAGGGTTGTCACAAATGTTGGAAACCCCCAAAGTGCTTATGCAGTTAAATTGGAACAGCCAAATGGAGTTTCAGTTACTGTTGAACCAAGGAAATTGAAATTTGAAAAAGTGGGTCAGAAATTGAGCTACAAGGTGACATTTTTGTCAATTGGAGGAGCAAGAGTTGCAGGTACCTCATCATTTGGGTCACTGGTTTGGGTATCTGGCAAATATAAAGTTAGAAGTCCTATGGCAGTGACCTGGAAATAG	2217	0.4244	MDQTKIKASNQDSTKPWYESIIDFISESSMQEDDEEDILAPQLLYTYETSMFGFAVHLSKKHLKYLNQVDGFLSAIPDELSTLHTTYSPHFLGLRNGRSLWSASNLATDVIIGVLDSGIWPEHISFQDSGMSPVPSHWKGVCEKGTKFSSSNCNKKLIGARTYYKGYEKFFGKKINETVDYLSPRDSEGHGTHTASTAAGRVVKNANLFGQARGTASGMRYTSRIAVYKVCWSSGCTNADVLAAMDQAVSDGVDVLSLSLGSIPKPFYSDSIAIASFGATKKGVFVACSAGNSGPFPSTVGNGAPWITTVAASSTDRSFPTKVKLGNGKTFEGSSLYQGKKTNQLPLVYGKSAGAKKEAQYCIGGSLDPKLVHGKIVACERGINGRTEKGEEVKVAGGAGMILLNNEYQGEELFADPHILPATSLGASASKTIRSYSQSVKKPTASISFMGTRFGDPAPVMAAFSSRGPSLVGPDVIKPDVTAPGVNILAAWPSKISPSFLMSDKRKVLFNILSGTSMSCPHVSGIAALLKSFHKDWSPAAIKSALMTTAYTLNNKGAPISDMASDNSPFATPFAFGSGHVNPVNASDPGLVYDISTKDYLNYLCSINYTSSQIALLSRGKFVCSKKTLLQAGNLNYPSFSVLFGRSASNASVTYRRVVTNVGNPQSAYAVKLEQPNGVSVTVEPRKLKFEKVGQKLSYKVTFLSIGGARVAGTSSFGSLVWVSGKYKVRSPMAVTWK	738

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma18g02606	738	Pfam	PA domain	346	431	IPR003137	-
	Gma18g02606	738	PANTHER	SUBTILISIN-LIKE PROTEASE SBT1.1	1	738	-	-
	Gma18g02606	738	Pfam	Subtilase family	109	561	IPR000209	GO:0006508\|GO:0008236
	Gma18g02606	738	Pfam	Fibronectin type-III domain	634	735	IPR041469	-
	Gma18g02606	738	Gene3D	Peptidase S8/S53 domain	109	600	IPR036852	GO:0004252\|GO:0006508
	Gma18g02606	738	CDD	PA_subtilisin_like	323	447	-	-
	Gma18g02606	738	PRINTS	Subtilisin serine protease family (S8) signature	107	126	IPR015500	-
	Gma18g02606	738	PRINTS	Subtilisin serine protease family (S8) signature	186	199	IPR015500	-
	Gma18g02606	738	PRINTS	Subtilisin serine protease family (S8) signature	514	530	IPR015500	-
	Gma18g02606	738	Gene3D	-	316	454	-	-
	Gma18g02606	738	ProSitePatterns	Serine proteases, subtilase family, serine active site.	515	525	IPR023828	-
	Gma18g02606	738	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	1	84	IPR037045	-
	Gma18g02606	738	SUPERFAMILY	Subtilisin-like	83	591	IPR036852	GO:0004252\|GO:0006508
	Gma18g02606	738	CDD	Peptidases_S8_3	82	551	IPR034197	-
	Gma18g02606	738	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	1	738	IPR045051	-
	Gma18g02606	738	Gene3D	-	604	737	-	-
	Gma18g02606	738	ProSiteProfiles	Serine proteases, subtilase domain profile.	86	587	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma18g02606	Gma-Chr18	60172148	60174364	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma18g02606	3	738	Subtilisin-like Serine Gene Family	AT1G01900	55.827	0.0	814

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma18g02606	-		-	gmx:100790006	1392.1