Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02592 ATGTCTTATCAGCATAAAAGCTTTTGGATGCCACGGGATGCTGGCTGCATGGCTGAAGAAAATGCGGGATATGAAAATTCTTCCAGAATTGAACCCAAGCGCAGTCATCAGTGGTTTATGGATACAGGTGAACCTGAAATATTCAGCAACAAGAAACAAGCAGTTGAAGCTGTTAGTGGCAGGCCAATTTCTGGAGTTTCACATGCAAATGTTTCCCAATGGGACACCAATTCAGGATTTCACTCAGTCACAAGTCAATTTTCTGACCGTCTTTTTGGATCTGATCTTGCTAGGACTGTGAATTTGGTTGATAAGAATGTGCCATCTATTGTAAGTGGAAATCTGAACATGGGAAGGAAAGATTTTGAGCATCAATATGGTAATGATCCTTCTGTGGGATTGTCAATATCCCATTCCATAGCAGACCCTTCATCATGTCTCAATTTTGGTGGCATCAGAAAAGTTAAAGTTAATCAAGTCAGAGATTCTGACAACTGCATGCCTGCTGCATCCATGGGGCCCTCCTATAGTAGGGAAGATAATAGTACAATTTCAGTAGGTGCTGGCTACAATAAGAATGATGGCGACAATATTTCATTGGGTCCTACTTATAACAATGGATATGACAACACCATTGCTATGGGGAGCAGAATTAGTAAGACTGATGACAATCTTCTTTCAATGGCTCACACCTTCAGTAAAGGGGATGGGGGTTTTATGTTGATGGGCCACAATTATGGCAAGGGAGATGAAAGTATCGtatcaatgggtcagccctttgacaagggagatggaaatttcatatcaatgggtcaatcatatgagaaggaagatggcaatttaatatcTCTGGGCACCTCATATACCAAGGTGGATTCAAATATTGCATCAACAGTTCCATCATATGACAGAGGAGATTCTAGTTCCTTACCTGTGGGTCAAAACCACCATAAGGGTCAGAGCAGTTCCATTTCTTTTGGAGGTTTTCATGATGACCCTGAACCAAATACCCCTGGTGGAATCATTAGTGGCTATGATCTGTTGATAGGAGGCCAGAACTCAGCTCAAGGATTGGATAGCCAGAACGACCTGACTGAGACAAACACTGAATCACTTGTAAATAGCATTCCAAAACCCAATACTAAAAATGATATTGTTGTTAAGAACAAAGAGCCAAAGACAACCAAGAAGGCTCCTACTAACAACTTCCCTTCAAATGTCAAAAGTTTGCTTTCAACTGGTATTTTTGATGGTGTTCAGGTGAAATATGTTTCGTGGTCACGGGAGAAAAGTCTTAAGGGAATAATAAAAGGAACTGGGTATTTGTGTTCATGTGACAACTGCAACCAGTCAAAGGCTCTTAATGCTTACGAGTTTGAGCGTCATGCTGGTGCTAAGACAAAACATCCTAACAATCACATATACTTTGAGAATGGAAAAACCATCTATGCTGTTGTTCAAGAGCTGAAAAATACTAATCAGGATATGCTTTTTGATGCTATTCAAAATGTGACTGGCTCTACCATCAACCAAAAGAACTTTCGAATATGGAAAGCATCATACCAAGCTGCTACTCGGGAGCTTCAGCGTATCTATGGAAAGGATGAAGTGGTCATTCCTTCATGA 1626 0.3862 MSYQHKSFWMPRDAGCMAEENAGYENSSRIEPKRSHQWFMDTGEPEIFSNKKQAVEAVSGRPISGVSHANVSQWDTNSGFHSVTSQFSDRLFGSDLARTVNLVDKNVPSIVSGNLNMGRKDFEHQYGNDPSVGLSISHSIADPSSCLNFGGIRKVKVNQVRDSDNCMPAASMGPSYSREDNSTISVGAGYNKNDGDNISLGPTYNNGYDNTIAMGSRISKTDDNLLSMAHTFSKGDGGFMLMGHNYGKGDESIVSMGQPFDKGDGNFISMGQSYEKEDGNLISLGTSYTKVDSNIASTVPSYDRGDSSSLPVGQNHHKGQSSSISFGGFHDDPEPNTPGGIISGYDLLIGGQNSAQGLDSQNDLTETNTESLVNSIPKPNTKNDIVVKNKEPKTTKKAPTNNFPSNVKSLLSTGIFDGVQVKYVSWSREKSLKGIIKGTGYLCSCDNCNQSKALNAYEFERHAGAKTKHPNNHIYFENGKTIYAVVQELKNTNQDMLFDAIQNVTGSTINQKNFRIWKASYQAATRELQRIYGKDEVVIPS 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02592 541 MobiDBLite consensus disorder prediction 356 384 - -
Gma18g02592 541 PANTHER AUTOIMMUNE REGULATOR 291 541 - -
Gma18g02592 541 PANTHER AUTOIMMUNE REGULATOR 1 293 - -
Gma18g02592 541 PANTHER N-LYSINE METHYLTRANSFERASE 291 541 - -
Gma18g02592 541 PANTHER N-LYSINE METHYLTRANSFERASE 1 293 - -
Gma18g02592 541 Pfam Tify domain binding domain 434 489 IPR032308 -
Gma18g02592 541 MobiDBLite consensus disorder prediction 356 382 - -
Gma18g02592 541 MobiDBLite consensus disorder prediction 302 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02592 Gma-Chr18 60050423 60054903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02592 393 522 PHD Transcription Factor Family AT3G53680 55.385 3.08e-41 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02592 - - gmx:100782217 1064.68