Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02586 ATGATGGTATCGAGAGGGTTGTTCGGGTGGTCCCCGCCGCACGTGCAACCGCTCACGCCGGTATCGGAGGTTTCGGAGCCACCGGAGTCACCGTCGCCATACCTGGACCCCGGCGCAGAGACCTCCGCGTCGCAGCAGGTGGAGGCGGAGGAGGAGATGGAGGAGCCGGAGGAGATCGAGCCGCCGCCCGCCGCGGTTCCGTTTTCGCAGCTCTTCGCATGCGCCGACCGCTTCGATTGGTTCCTCATGGCCATTGGTTCCGTCGCCGCCGCGGCGCACGGCACCGCGCTCGTCGTTTACTTGCACTACTTCGCGAAGATCATCCACGTGCTGCGGTTGGATCCTCCTAACGGCACGTCGCAGGAGCAGTTTGACAGGTTCACCGAGCTTGCTTTAACCATTGTTTATATTGCTGCGGGAGTTTTTGTTGCTGGTTGGATTGAGGTTTCATGTTGGATTTTGACGGGAGAACGGCAGACTGCTGTCATCAGGTCAAATTATGTTCAAGTACTACTTAATCAAGACATGAGTTTTTTTGATACTTATGGGAATAATGGAGACATTGTGAGTCAAGTATTAAGTGATGTGCTGCTTATCCAGTCCGCCCTTAGTGAAAAAGTTGGGAATTATATTCATAATATGGCTACATTCTTCAGTGGTCTTGTCATTGGCCTTGTCAATTGTTGGCAGATTGCTTTGATAACGTTAGCCACGGGTCCGTTTATTGTTGCTGCTGGAGGAATATCAAACATATTCCTCCATAGGCTTGCAGAGAATATCCAAGATGCATATGCTGAAGCAGCTAGCATTGCTGAACAGGCAGTTTCCTATATAAGGACATTGTATGCATTTTCAAATGAAACTTTGGCTAAGTATTCATATGCAACATCACTGCAAGCTACTCTTAGATATGGTATATTAATAAGTCTTGTTCAAGGGCTTGGTCTTGGATTTACTTATGGACTAGCAATATGTTCTTGTGCATTACAACTCTGGGTTGGAAGATTCTTGGTTATTCACGGAAAAGCACATGGTGGTGAAATTATAACAGCTCTTTTTGCTGTAATTCTAAGTGGCCTGGGATTAAATCAAGCAGCGACAAATTTCTACTCATTTGATCAGGGACGAATAGCTGCTTATAGACTATTTGAGATGATAAGTCGGTCATCCTCATCTGTTAATCATGATGGCACTTCCCCTGATTCTGTGCTAGGAAATATAGAGTTCCGGAATGTTTATTTCAGCTATCTTTCTCGTCCTGAAATCCCTATCTTGAGTGGATTTTATCTCACTGTACCTGCTAAGAAAGCTGTAGCACTTGTTGGCAGAAATGGCTCTGGAAAAAGTAGTATTATTCCACTCATGGAGCGTTTTTATGATCCTACATTAGGAGAAGTTCTTTTAGATGGTGAAAATATCAAGAATTTGAAACTGGAATGGCTGAGGAGCCAAATAGGACTAGTCACCCAGGAGCCTGCTTTGCTCAGTTTGAGTATAACAGACAACATTGCTTATGGGAGGGATGCTACCATGGATCAAATTGAAGAGGCTGCTAAAATAGCTCATGCACATACATTTATCAGCTCATTAGAGAAAGGTTATGACACACAGGTTGGCAGGGCTTGTCTAGCTTTGACCGAAGAGCAGAAAATAAAACTTTCTATTGCTAGAGCTGTGCTTCTAAATCCATCAATTCTTCTTCTTGATGAGGTTACTGGTGGACTTGATTTTGAGGCTGAGAGGGCTGTTCAGGGGGCTCTGGATTTGCTTATGTTGGGACGCTCAACAATAATAATTGCTCGAAGGCTTAGTCTCATAAAGAATGCTGACTATATAGCCGTTATGGAGGAAGGTCAGCTTGTTGAAATGGGTACTCATGATGAATTATTAACACTGGATGGCTTATATGCAGAGCTTCATCGATGTGAAGAGGCCGCAAAACTTCCCAAGAGGATGCCTGTTCGAAACTACAAGGAAACTTCAGCCTTCCAAATTGAGAAGGATTCTTCAAGTCATAGCTTCAAAGAACCATCATCCCCTAAAATGATGAAGTCACCCTCTCTTCAAAGAGTTTCTAATGTATCCCGACCTCCAGATGGCGTCTTTAACTTGCTAGAATCACCTCAAGTCCGGAGTCCACCGCCTGAGAAAATGCTTGAAAATGGTCTGGCGTTGGATGTAGCAGATAAGGAGCCATCAATAAGAAGGCAGGATAGTTTTGAAATGAGACTGCCGGAGTTACCCAAGATTGATGTTCATTCTGTGCAACGACATATGTCAAATGATTCTGATCCAGAATCTCCCATTTCACCTCTTTTAACATCTGATCCTAAAAGTGAACGCTCCCATTCACAGACTTTTAGTAGACCACATAGTCATTCTGATGATGTTTCAGTTATAATGAGAGAAACAAAGGGTGCACGGCATCGAAAACCACCATCACTGCAGAAGCTGGCTGAGCTTAGTTTTGCTGAGTGGCTTTATGCTGTGTTAGGAAGCATAGGTGCTGCTATCTTTGGGTCTTTCAATCCCCTTCTTGCTTATGTTATTGGTCTTGTGGTGACAGCTTACTATAGAATTGATGACACTCATCACCTTGAACGGGAGGTAGACAGGTGGTGCTTGATCATTGGCTGCATGGGTATTGTAACTTTAGTTGCCAACTTTTTACAGCATTTCTACTTTGGTATTATGGGAGAGAAAATGACGGAAAGAGTTAGGAGAATGATGTTCTCAGCCATGCTACGCAATGAAGTGGGATGGTTTGATGATGAGGAAAACAGTGCTGACAATTTGTCCATGCGATTGGCCAATGATGCTACTTTTGTGCGAGCTGCTTTTAGCAACAGGCTTTCCATATTTATACAGGACAGTGCTGCAGTTATTGTTGGTCTTCTCATTGGTGCTTTGCTGCACTGGCGGTTAGCACTTGTGGCTTTTGCAACCCTTCCAATTCTCTCTGTTTCTGCCATTGCCCAGAAATTTTGGCTTGCGGGATTTTCGAGGGGCATCCAGGAAATGCACAAAAAGGCATCTTTGGTTCTTGAAGATGCAGTTAGGAACATTTACACTGTTGTTGCCTTTTGTGCTGGTAATAAGGTAATGGAGCTCTACAGGCTGCAATTAAAGAAAATATTTAAGCAGAGCTTTCTTCATGGGATGGCAATTGGTTTTGCATTTGGCTTTTCACAGTTTCTACTTTTTGCCTGTAATGCCCTGCTACTTTGGTACACTGCAATATGTATAAAACGTGGTTACATGGATCCACCTACTGCACTCAAGGAGTACATGGTTTTTTCATTTGCAACATTTGCACTTGTGGAGCCTTTTGGATTGGCTCCTTACATACTTAAACGACGAAAATCTCTCATATCTGTGTTTGACATTATAGATCGTGTGCCTAAAATTGATCCTGATGATACCTCAGCATTGAAGCCACCCAATGTATATGGAAGCCTCGAGTTAAAAAATGTTGATTTTTGTTACCCATCTCGTCCTGAAGTGTTGGTATTGAGCAATTTTAGCCTCAAAGTCACTGGGGGCCAAACAGTTGCTATTGTGGGAGTTTCTGGGTCAGGAAAGAGCACTATAATATCTTTGATCGAGAGGTTTTATGATCCAGTTGCAGGCCAAGTTTTCCTGGATGGTAGGGATTTAAAGGAATATAACTTGAGATGGTTGAGGAGCCACCTTGGTCTTGTTCAGCAGGAACCTATTATCTTCTCAACAACCATAAGGGAAAACATTATATATGCAAGGCATAATGCAACTGAAGCTGAGATGAAAGAGGCTGCAAGAATAGCAAATGCTCATCATTTCATTAGCAGTTTGCCTCATGGTTATGATACTCATGTTGGGATGAGAGGTGTTGACTTAACCCCAGGACAGAAACAGAGAATTGCAATTGCTAGGGTAGTGCTGAAAAATGCCCCTATCTTGTTGTTGGATGAAGCTAGTTCAGCAATTGAATCTGAGTCAAGCCGAGTAGTGCAAGAGGCTCTAGACACGCTAATTATGGGAAACAAGACTACTATTTTAATAGCACATAGGGCTGCAATGATGAGGCATGTGGACAATATTGTAGTGCTTAATGGAGGACGGATAGTGGAGGAGGGCAGTCATGATACATTGGTAGCCAAGAATGGTTTGTATGTCCGACTGATGCAACCTCATTTTGGTAAGGCTTTGCGTCAACATCGGCTTGTTTAG 4209 0.4357 MMVSRGLFGWSPPHVQPLTPVSEVSEPPESPSPYLDPGAETSASQQVEAEEEMEEPEEIEPPPAAVPFSQLFACADRFDWFLMAIGSVAAAAHGTALVVYLHYFAKIIHVLRLDPPNGTSQEQFDRFTELALTIVYIAAGVFVAGWIEVSCWILTGERQTAVIRSNYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGLVNCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFSNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVIHGKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSVNHDGTSPDSVLGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSITDNIAYGRDATMDQIEEAAKIAHAHTFISSLEKGYDTQVGRACLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQGALDLLMLGRSTIIIARRLSLIKNADYIAVMEEGQLVEMGTHDELLTLDGLYAELHRCEEAAKLPKRMPVRNYKETSAFQIEKDSSSHSFKEPSSPKMMKSPSLQRVSNVSRPPDGVFNLLESPQVRSPPPEKMLENGLALDVADKEPSIRRQDSFEMRLPELPKIDVHSVQRHMSNDSDPESPISPLLTSDPKSERSHSQTFSRPHSHSDDVSVIMRETKGARHRKPPSLQKLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLVVTAYYRIDDTHHLEREVDRWCLIIGCMGIVTLVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDDEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVGLLIGALLHWRLALVAFATLPILSVSAIAQKFWLAGFSRGIQEMHKKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFKQSFLHGMAIGFAFGFSQFLLFACNALLLWYTAICIKRGYMDPPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFDIIDRVPKIDPDDTSALKPPNVYGSLELKNVDFCYPSRPEVLVLSNFSLKVTGGQTVAIVGVSGSGKSTIISLIERFYDPVAGQVFLDGRDLKEYNLRWLRSHLGLVQQEPIIFSTTIRENIIYARHNATEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSAIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGSHDTLVAKNGLYVRLMQPHFGKALRQHRLV 1402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02586 1402 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1153 1390 IPR003439 GO:0005524
Gma18g02586 1402 SUPERFAMILY ABC transporter transmembrane region 817 1138 IPR036640 GO:0005524|GO:0016021
Gma18g02586 1402 SMART AAA_5 1180 1367 IPR003593 -
Gma18g02586 1402 SMART AAA_5 434 613 IPR003593 -
Gma18g02586 1402 MobiDBLite consensus disorder prediction 1 62 - -
Gma18g02586 1402 MobiDBLite consensus disorder prediction 675 696 - -
Gma18g02586 1402 MobiDBLite consensus disorder prediction 757 798 - -
Gma18g02586 1402 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 399 641 IPR027417 -
Gma18g02586 1402 Pfam ABC transporter 1171 1319 IPR003439 GO:0005524
Gma18g02586 1402 Pfam ABC transporter 428 572 IPR003439 GO:0005524
Gma18g02586 1402 Pfam ABC transporter transmembrane region 85 357 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma18g02586 1402 Pfam ABC transporter transmembrane region 835 1099 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma18g02586 1402 Gene3D ABC transporter type 1, transmembrane domain 61 388 IPR036640 GO:0005524|GO:0016021
Gma18g02586 1402 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1143 1389 IPR027417 -
Gma18g02586 1402 PANTHER ABC TRANSPORTER B FAMILY 19 1398 - -
Gma18g02586 1402 SUPERFAMILY ABC transporter transmembrane region 71 382 IPR036640 GO:0005524|GO:0016021
Gma18g02586 1402 CDD ABC_6TM_Pgp_ABCB1_D2_like 825 1136 - -
Gma18g02586 1402 MobiDBLite consensus disorder prediction 661 725 - -
Gma18g02586 1402 Gene3D - 1143 1397 IPR027417 -
Gma18g02586 1402 Gene3D - 397 650 IPR027417 -
Gma18g02586 1402 Gene3D ABC transporter type 1, transmembrane domain 799 1141 IPR036640 GO:0005524|GO:0016021
Gma18g02586 1402 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 19 1398 - -
Gma18g02586 1402 CDD ABC_6TM_Pgp_ABCB1_D1_like 83 382 - -
Gma18g02586 1402 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 84 374 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma18g02586 1402 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 830 1122 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma18g02586 1402 MobiDBLite consensus disorder prediction 782 798 - -
Gma18g02586 1402 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 407 642 IPR003439 GO:0005524
Gma18g02586 1402 MobiDBLite consensus disorder prediction 761 781 - -
Gma18g02586 1402 Coils Coil 253 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02586 Gma-Chr18 59996515 60005349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02586 53 698 Calmodulin-binding Proteins AT2G36910 43.405 3.36e-164 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02586 K05658 - gmx:100779000 2672.89