Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02584 ATGGCTCCTGCTAAGGCGGACAATGCCAAAAAGGCTGATCCCAAAGCTCAGGCTTTGAAGACAGCAAAGGCTGTCAAATCAGGTGGCCAAGTGTTTAAGAAGAAAGCTAAAAAGATCAGGACATCTGTTACATTTCACAGGCCAAGGACATTGAAGAAAGAAAGGAACCCTAAGTACCCTCGTATTAGTGCTCCACCCAGAAACAAGTTGGACCATTACCAGATACTTAAATTTCCTCTAACTACTGAGTCTGCAATGAAGAAAATTGAGGATAACAACACACTGGTTTTTATTGTTGACCTCCGTGCTGACAAAAAGAAGATTAAAGATGCTGTGAAGAAGATGTATGACATTCAGGCGAAGAAAGTGAATACTTTAATCAGGCCTGATGGAACAAAGAAAGCCTATGTTAGGTTGACTCCAGACTATGATGCCTTGGATGTAGCTAACAAGATTGTCACAAACCATTCCATTGTTTCCCCTGTGAGTCATCATTGTCATCTGCTACCATCTTCCAACAAGCAGTCTCAGATTGCATGCAGAGCAGAGTAG 552 0.4203 MAPAKADNAKKADPKAQALKTAKAVKSGGQVFKKKAKKIRTSVTFHRPRTLKKERNPKYPRISAPPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFIVDLRADKKKIKDAVKKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIVTNHSIVSPVSHHCHLLPSSNKQSQIACRAE 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02584 183 MobiDBLite consensus disorder prediction 1 40 - -
Gma18g02584 183 Pfam Ribosomal protein L23 75 137 IPR013025 GO:0003735|GO:0005840|GO:0006412
Gma18g02584 183 Gene3D - 36 154 IPR012677 -
Gma18g02584 183 PANTHER 60S RIBOSOMAL PROTEIN L23A-2 1 152 - -
Gma18g02584 183 Pfam Ribosomal protein L23, N-terminal domain 15 65 IPR005633 -
Gma18g02584 183 Hamap 50S ribosomal protein L23 [rplW]. 75 155 IPR013025 GO:0003735|GO:0005840|GO:0006412
Gma18g02584 183 ProSitePatterns Ribosomal protein L23 signature. 133 148 IPR001014 -
Gma18g02584 183 PANTHER 60S RIBOSOMAL PROTEIN L23A 1 152 IPR013025 GO:0003735|GO:0005840|GO:0006412
Gma18g02584 183 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 72 148 IPR012678 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02584 Gma-Chr18 59980626 59983439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02584 1 152 Cytoplasmic Ribosomal Protein Gene Family AT2G39460 86.842 1.59e-66 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02584 K02893 - gmx:100777933 286.96