Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02583 ATGGTGGGGAACGATGACGCGGGCCACCTCTCCGCCTCCCGGAAGATGTTCTGGCGGTCGGCGTCGTGGTCCTCCTCGCGAACCGCCGCCGGAAACGCCTCTTCCGGCGAGACGGAGAAGGGTTTCGCCGATTCCGGTGCCGCTGACGGTACTCACGGCCAGAACCGGCGGTTTGGTCCGCCGCCGCTGACGCCTCGGTCGCAGCAGAATTGCAAGGCGCGGTCGTGCCTGCCACCGCTGCAGCCGCTCTCCATCGCCCGGCGGAGCCTCGACGAGTGGCCGAAGGCGGGCTCCGACGACATCGGTGAGTGGCCGCAGCCGCCTACCACCCCCGGCGGGAGAGGTAATGGTAGCAATGGTGAAAGGTTGAAACTTGATTTGTCTTCCATTCAGCATAACAACCCTGATCATAGTAGGAGTAACAATGGGAATGGGCTTGTGAAGAGGGATAAGATTGCATTTTTTGATAAAGAGTGTTCAAAAGTTGCTGATCATGTGTACCTTGGTGGTGATGCTGTTGCCAGGGATAGGGACATCTTGAAGCATAATGGGATAACTCATGTCTTGAATTGTGTGGGGTTTGTGTGTCCTGAGTACTTTAAGGCTGATTTTGTTTATAGGACTTTGTGGCTGCAGGATAGTCCATCTGAGGATATTACTAGTATTTTGTATGATGTGTTTGACTATTTTGAGGATGTCAGGGAGCAAGGTGGGAGGGTGTTTGTGCACTGTTGTCAAGGGGTGTCTAGGTCTACCTCCTTGGTCATTGCTTACCTTATGTGGAGGGAAGGGCAGAGTTTTGATGATGCTTTTCAGTTTGTGAAGGCGGCGAGAGGGATTGCTGATCCAAATATGGGGTTTGCTTGCCAGCTGTTGCAGTGCCAGAAGAGGGTTCATGCTGTCCCTCTTAGCCCTAGCTCTTTGCTGAGGATGTATAGAATTGCTCCCCATTCGCCGTATGATCCTTTGCATCTTGTTCCAAAAATGTTGGTGGATCCTTCATTAGCTGCATTGGACTCCAGAGGTGCGTTTATCGTGCACATTCCTTCAGCAATATATGTTTGGGTGGGTAAGAACTGTGAGGCCACCATGGAGAGGGACGCCAGAGGGGCTGTTGGCCAGATTGTCCGGTATGAGAAGGTACAAGGGCCTATTGTGATGATTAAGGAAGGTGAGGAGCCTGTTTACTTTTGGGATGCTTTTTCAGATTTTCTGCCCTTAATGGACAAATCTGGCAAATCTGGCAGTAGGATAGAAGATGGAAAACTATTTGTTTTGCCTGGTAAGAGGAGAGTAGATGCATACAATGTTGATTACGAAGTTTTCACAAAAGCAATCACGGGAGGCTTCGTGCCTCCATTTGGTTCATCTGGTGAACATGAAACCCATTTGCCTGCAAGGGAGAGTAGTTGGAGTGTAAGGCGTAAAGTTTCCcatggtaacatgaaagaggttgtttcggtccctcGGCTATCGTTTCCAAGGGTTTATTCGGATTCCATGTTGTGTCTTCGTACATCAGCAAATGCAATTTTGTCTCCATCCTCATCCCTGTCGTCATCTTCATCATCTATATCATCATCATCCTCACCGTCTTTTGTTTCTCCAGATTCCATTACTTCTGATTCTAGCATTCATTCAAAGTTTTTGTTAGAAGTGTCCCCAGACTCTTCATCTCTGTCtaatttttctagtttgtcaatcacatcaaattctacttctcataatttttctagtttgtccatcacatcaaattctacttctcaACCAGTGTCTCACAGTACAGATATCCTTGGTGTCAAGTTATCACATCCCTTGTTTCAGTCAGCCTCTTTACCATTGAAGAAACCATCAACTTCCCTTGCTGAACGCAGAGGTAGCTTGTCAAAAATTCTGATGTTGCCGCTAATGAATGATAAGACACAAGTAACAGATAAATCGACAACGTCTCATGCTAGTCAAGAATCTGACATTCTTGTTAATGACAATGTTAGCTATCAACAACAATCAGATAGTAAAGATTATTTTTGCGGGTCTAACAACCATGCCAAGGATGGAGGTGTGAATTCCATTCAAAAGTGTGAGCCAAGCATTGCTGATAGCATGCACCTCAAGGAATCATCACTTAGTCAGTCTACCACATTGAAGGGAACTAATGACAGTGGCTTACTGCAGTATAATGTCGCACAGACTTCGGTATATCACTGGCCCAGTATAGAAAAGATTGAGACATTTGGTGCAAGTCATTTGGATTCTAAATCTGCTTTTGTCATATTCTCTCCCAGTATGCATGTACATGCAGGGAACATTTTATATATTTGGGTAGGGAGGTCTTTCAGTTGTGACGCTTCACAGGTTCACTTAGATATTGATAAACAATCAGATGTAGGAGCTGTCGACTGGAATCAAATTGGATGTGATCTCCTTGCTCGGTTTAGTTTGCCAAAGAACTCAGTCATCAAGGTTGTTAAAGAGAATGAGGAACCCTCAGAGTTCCTTGCTTTGCTGAGTTCATTGTAG 2520 0.446 MVGNDDAGHLSASRKMFWRSASWSSSRTAAGNASSGETEKGFADSGAADGTHGQNRRFGPPPLTPRSQQNCKARSCLPPLQPLSIARRSLDEWPKAGSDDIGEWPQPPTTPGGRGNGSNGERLKLDLSSIQHNNPDHSRSNNGNGLVKRDKIAFFDKECSKVADHVYLGGDAVARDRDILKHNGITHVLNCVGFVCPEYFKADFVYRTLWLQDSPSEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQFVKAARGIADPNMGFACQLLQCQKRVHAVPLSPSSLLRMYRIAPHSPYDPLHLVPKMLVDPSLAALDSRGAFIVHIPSAIYVWVGKNCEATMERDARGAVGQIVRYEKVQGPIVMIKEGEEPVYFWDAFSDFLPLMDKSGKSGSRIEDGKLFVLPGKRRVDAYNVDYEVFTKAITGGFVPPFGSSGEHETHLPARESSWSVRRKVSHGNMKEVVSVPRLSFPRVYSDSMLCLRTSANAILSPSSSLSSSSSSISSSSSPSFVSPDSITSDSSIHSKFLLEVSPDSSSLSNFSSLSITSNSTSHNFSSLSITSNSTSQPVSHSTDILGVKLSHPLFQSASLPLKKPSTSLAERRGSLSKILMLPLMNDKTQVTDKSTTSHASQESDILVNDNVSYQQQSDSKDYFCGSNNHAKDGGVNSIQKCEPSIADSMHLKESSLSQSTTLKGTNDSGLLQYNVAQTSVYHWPSIEKIETFGASHLDSKSAFVIFSPSMHVHAGNILYIWVGRSFSCDASQVHLDIDKQSDVGAVDWNQIGCDLLARFSLPKNSVIKVVKENEEPSEFLALLSSL 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02583 839 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 151 299 IPR029021 -
Gma18g02583 839 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 217 278 IPR000387 GO:0016311|GO:0016791
Gma18g02583 839 MobiDBLite consensus disorder prediction 19 39 - -
Gma18g02583 839 MobiDBLite consensus disorder prediction 61 75 - -
Gma18g02583 839 MobiDBLite consensus disorder prediction 19 77 - -
Gma18g02583 839 Pfam Dual specificity phosphatase, catalytic domain 166 296 IPR000340 GO:0008138|GO:0016311
Gma18g02583 839 SUPERFAMILY Actin depolymerizing proteins 742 837 - -
Gma18g02583 839 SUPERFAMILY Actin depolymerizing proteins 307 413 - -
Gma18g02583 839 ProSitePatterns Tyrosine specific protein phosphatases active site. 242 252 IPR016130 GO:0016311|GO:0016791
Gma18g02583 839 MobiDBLite consensus disorder prediction 94 122 - -
Gma18g02583 839 CDD DSP 159 293 - -
Gma18g02583 839 Gene3D Protein tyrosine phosphatase superfamily 131 300 IPR029021 -
Gma18g02583 839 SMART dsp_5 158 297 IPR020422 GO:0006470|GO:0008138
Gma18g02583 839 MobiDBLite consensus disorder prediction 514 534 - -
Gma18g02583 839 Gene3D Severin 309 405 IPR029006 -
Gma18g02583 839 PANTHER MKPA PROTEIN 1 833 - -
Gma18g02583 839 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 1 833 - -
Gma18g02583 839 ProSiteProfiles Dual specificity protein phosphatase domain profile. 158 300 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02583 Gma-Chr18 59972370 59977068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02583 2 194 Protein tyrosine phosphatase (PTP) family AT3G55270 60.622 4.41e-65 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02583 - - gmx:100777406 1588.16