Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02556 ATGACTCAGGCGGTGGAGGTGCTGAATCGGTATGGGACGGATCTGGTGGGGGAGCCGAGAGGTTCTGATTCTGAGTGTTTGGCGGGTTTTGAGTGTTTTCTGAACATTGTGAGGGCATTGGGAATGGGATCGTGCATCTCGGAGGTTGGAGCTGGTGGAAGTTCCCCTCCTCTTCTTCCTTTTTCGCCTGAATCGAACATGGATGGTGGGAAGAGGAGAAGGTTAAGGGGTTCCTCTTCCTTTGATTTCAAAGTGCCTGGGAGGATGTTCTTGAATGGGTCAAGCGAGGTTGCATCCATGTATTGCAAGCAAGGAAGAAAAGGGATCAACCAAGATGCTATGCTTGTTTGGGAGAACTTTTGTTCAAAGGAAGACACCATTTTTTGTGGTGTTTTTGATGGTCATGGACCTTATGGCCACAGGGTTGCAAAGAAAGTTAGGGATTCTTTTCCTTTAAAGCTTAATGCCCAATGGGATTTGCATCATAAGAATAGAGATGGACTCAGTGATCATAGCAGCGCCACAGGAAGTTATAAATCTGAAGGGAATGGATTTAGACTGGTGGATGAGAAAACTAGTCCCACTGATCATGAACTTGATGAAACAGATACGATTTTGACATTACGAGAATCGTTTTTGAAGGCTTGTAAGATTATGGATAAAGAACTGAAACATCATCCTGATATTGACTGCTTTTGTAGTGGGACTACAGCAGTTACTTTGGTCAAGCAGGGGCTGAACCTTGTTattggaaatgttggtgactcgagagctgtattgggtacccgagatcatgaggattcccttattgctgttcagttgaccgttgaccttaagccaaatcttccaaGGGAAGAAGAGAGGATCAAGCTTCGTAGAGGAAGGGTTTTTTCCCTTCAGAATGAACCTGATGTGGCTCgagtttggctgcctaactctgatttccctggtcttgctatggctcgggcatttggagatttttgccttaaggactttggattgattgctgttccagatatctcatatcaccgccttaccgagaaggatgaatttgttgtgttagcaacagatgggatttgggatgttctgtcaaatgaagaagttgtggacattgtggcatctgcttcacagtctactgctgctagagcactggttgagtcagctgttcgggcatggaagacaaaatttcctttttgtaaggttgatgattgtgccgcagtttgcctcttcttTGATTCTGATTTAGATTTCAAGTCAACAGATACAAAAGACAAGTTAATACCGGAGGCATCTATTGACCAATCTGAGCAGTTAGCTTTACTTGGTGAAAAGGGAGTTGGAAATGAAGCTGAAAAAAAGCAGCAATAG 1368 0.3048 MTQAVEVLNRYGTDLVGEPRGSDSECLAGFECFLNIVRALGMGSCISEVGAGGSSPPLLPFSPESNMDGGKRRRLRGSSSFDFKVPGRMFLNGSSEVASMYCKQGRKGINQDAMLVWENFCSKEDTIFCGVFDGHGPYGHRVAKKVRDSFPLKLNAQWDLHHKNRDGLSDHSSATGSYKSEGNGFRLVDEKTSPTDHELDETDTILTLRESFLKACKIMDKELKHHPDIDCFCSGTTAVTLVKQGLNLVIGNVGDSRAVLGTRDHEDSLIAVQLTVDLKPNLPREEERIKLRRGRVFSLQNEPDVARVWLPNSDFPGLAMARAFGDFCLKDFGLIAVPDISYHRLTEKDEFVVLATDGIWDVLSNEEVVDIVASASQSTAARALVESAVRAWKTKFPFCKVDDCAAVCLFFDSDLDFKSTDTKDKLIPEASIDQSEQLALLGEKGVGNEAEKKQQ 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02556 455 CDD PP2Cc 97 411 IPR001932 -
Gma18g02556 455 SMART PP2C_4 91 409 IPR001932 -
Gma18g02556 455 Pfam Protein phosphatase 2C 182 390 IPR001932 -
Gma18g02556 455 MobiDBLite consensus disorder prediction 184 198 - -
Gma18g02556 455 MobiDBLite consensus disorder prediction 165 198 - -
Gma18g02556 455 Gene3D - 92 419 IPR036457 -
Gma18g02556 455 ProSiteProfiles PPM-type phosphatase domain profile. 97 411 IPR001932 -
Gma18g02556 455 SUPERFAMILY PP2C-like 94 412 IPR036457 -
Gma18g02556 455 PANTHER ALPHABET, ISOFORM E-RELATED 42 419 - -
Gma18g02556 455 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 42 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02556 Gma-Chr18 59721810 59726901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02556 42 413 PP2C-type Phosphatase Gene Family AT3G02750 55.196 4.69e-146 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02556 - - gmx:100810538 905.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02556 18 59721810 59726901 Gma08g02412 08 23938081 23943182 GST