Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02547 ATGTTTAGGAAAAGGCACACCCTTTCTTCTCTTGCAAGGGAATTGTTGGCATTTCAGCCACTTTTTCTTCTCTTCTTGTTCAGCTTGCACCACAACACTATGCAGTGTCAAGGAAGGTTGAGTAAACATGTTTCTTCTGAGCCTCCCTCACCTTCTAGGTCAACACCATCACCACCATCTTCATCAGGATACAAGGATGACCCTAGGAAGATAATTTTGAGCATGGTTTTAGGAGCAGTCACTGGACTAGTTTCTTCTGCTCTCTTTGCACTTGTGGTTCGTTGTGTTGTTCAGTATCTGAACCGCACACCAATCCTCAAGGGACCTGTCATATTCTCCCCCAAAATTGCCCCCATGACACTCCAATCAGCTTTGGCAAAGGAAAACCACTTGCTCGGTTCGAGTCCTAATGGGAAGTACTACAAAACTGTGCTTGACAATGGACTCACTATTGCAGTCAAAAGGCTAACACCCTTTGAGAGTAATTCCCCGGAGGCTAAGAGAAAATCAGTGAAGAGGCAGATACAAACTGAGCTTGAGCTTCTTGCAAGCCTTAGGCATAGGAACTTGATGAGTTTAAGGGCCTATGTTCGTGAGCCTGATGGGTTCTCATTGGTTTATGATTATGTTTCCACTGGGAGTCTTGCTGATGTGTTGAGTAAAGTGAGGGAGAATGAGTTGCCCTTTGGTTGGGAAGTTAGGCTCAGGATTGCTGTTGGTGTGGTGAAGGGTCTTCAGTATCTTCATTTCACTTGTGTGCCTCAGATTCTGCACTACAACTTGAAGCCCACAAATGTGATGTTGGATGCTGAGTTTGAACCTAGATTGGCAGATTATGGGTTGGCTAAACTTCTACCCAATTTGGATGGAGGAAGTTCTCTCTACACTCCTCCTGAATGTTTCCATAATTGCAGCAGGTACACTGACAAAAGTGACATCTTTAGTTTTGGCATGATACTAGGTGTTTTGTTAACTGGTAAGGATCCTACAGATCCATTCTTTGGAGAAGCAGCCAGTGGGGGAAGTTTGGGATGTTGGCTGAGACACTTGCAGCAAGCGGGCGAGGCGCACGAAGCTCTAGATAAGAGCATGTTAGGGGAAGAAGGTGAGGAAGATGAGATGCTAATGGCGGTTAGGATTGCTGCTGCATGCCTCTCTGATATGCCTGCAGATAGGCCTTCTAGTGATGAGCTTgttcacatgctaacgcaactgcacagtttttga 1227 0.4434 MFRKRHTLSSLARELLAFQPLFLLFLFSLHHNTMQCQGRLSKHVSSEPPSPSRSTPSPPSSSGYKDDPRKIILSMVLGAVTGLVSSALFALVVRCVVQYLNRTPILKGPVIFSPKIAPMTLQSALAKENHLLGSSPNGKYYKTVLDNGLTIAVKRLTPFESNSPEAKRKSVKRQIQTELELLASLRHRNLMSLRAYVREPDGFSLVYDYVSTGSLADVLSKVRENELPFGWEVRLRIAVGVVKGLQYLHFTCVPQILHYNLKPTNVMLDAEFEPRLADYGLAKLLPNLDGGSSLYTPPECFHNCSRYTDKSDIFSFGMILGVLLTGKDPTDPFFGEAASGGSLGCWLRHLQQAGEAHEALDKSMLGEEGEEDEMLMAVRIAAACLSDMPADRPSSDELVHMLTQLHSF 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02547 408 Pfam Protein kinase domain 128 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02547 408 CDD STKc_IRAK 132 405 - -
Gma18g02547 408 Gene3D Transferase(Phosphotransferase) domain 1 210 407 - -
Gma18g02547 408 SUPERFAMILY Protein kinase-like (PK-like) 129 402 IPR011009 -
Gma18g02547 408 ProSiteProfiles Protein kinase domain profile. 126 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02547 408 Gene3D Phosphorylase Kinase; domain 1 118 209 - -
Gma18g02547 408 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE CORYNE 12 408 - -
Gma18g02547 408 PANTHER - 12 408 - -
Gma18g02547 408 MobiDBLite consensus disorder prediction 40 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02547 Gma-Chr18 59586967 59588873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02547 72 405 Receptor kinase-like Gene Family AT2G31880 35.211 1.74e-64 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Gma18g02547 Pkinase 1.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02547 - - gmx:102664172 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02547 18 59586967 59588873 Gma08g02398 08 23720483 23722570 GST