Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02540 ATGCAGAAGAAGACCCATGAGAGCATCAACAACAGGCTTGCTCTTGTCATGAAGAGCGGCAAATACACCCTTGGTTATAAGACCGTTCTCAAATCTCTTAGGAGCTCCAAAGGGAAATTGATTATCATTGCTAACAACTGCCCCCCTTTGAGAAAGTCAGAGATTGAATACTATGCCATGTTGGCAAAGGTTGGAGTTCATCATTACAATGGGAACAATGTGGATTTGGGCACTGCCTGCGGCAAATATTACAGAGTGTGCTGCCTTAGCATTATTGATCCTGGTGATTCGGATATCATTAAGACACTGCCTGGTGAACAGTAA 324 0.4352 MQKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKTLPGEQ 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02540 107 ProSitePatterns Ribosomal protein L30e signature 1. 19 43 IPR022991 -
Gma18g02540 107 Gene3D - 1 103 IPR029064 -
Gma18g02540 107 SUPERFAMILY L30e-like 8 101 IPR029064 -
Gma18g02540 107 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 8 100 IPR004038 -
Gma18g02540 107 ProSitePatterns Ribosomal protein L30e signature 2. 75 95 IPR022991 -
Gma18g02540 107 Hamap 50S ribosomal protein L30e [rpl30e]. 7 104 IPR000231 GO:0003723|GO:0003735|GO:0022625
Gma18g02540 107 PANTHER RIBOSOMAL PROTEIN L30 2 107 IPR039109 GO:0003723
Gma18g02540 107 PANTHER RIBOSOMAL PROTEIN L30E-RELATED 2 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02540 Gma-Chr18 59499145 59500706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02540 3 107 Cytoplasmic Ribosomal Protein Gene Family AT3G18740 87.619 1.43e-67 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02540 K02908 - gmx:100806260 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02540 18 59499145 59500706 Gma08g02391 08 23641459 23643528 GST