Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02532 ATGGCTTCAGCAAACCCTTCCCCAAATGCTTCCCCTGTTGCAGTGCCTCCAGCACTTGGTGCTATTTTATCACCACCTCCTTCTTCATCTTCTCCAACAAACACTTCCACCCCACCATCACCTCCCAGTTCTTCTCAGCCTAATcaaacacaaacacaaacacaaacacCCAATTCCCCTGCTCCTTCATCTCCTTCTGACCCTTCTGCTCCACCTCCTTCTCCTCCTCAGGCAGTGCCATTAACCCCTCCTCCTTCCATATCACTGTCTCCTCCACCATCATCTACACCACCACCAACTTTGCCCCCTCCATCACCACCTGATTCTCCACCACCATTGCCACCTGcatctccaaccccaccagttacaacatctcccccctcaccaccagttacaacatctcccccctcaccaccagctaccacatcccctcctcCAGCTGAAACTCCACCTTCCCTTCCAAATTTGTCTCCACCATCTCCACCAGCCGGTTCCCCTCCTCCTCAATCACCTCCCACAACAATTCCACCTCCCTCTCGACCGATTTCGCCATCTCCTCCTCCTCCGGCCAATTTTCCAAGGCCACCAACCACTAGAACTCCTCCAGAGAAAGAAAATCCACCAAAAACTACTCCTTCACATGCATCTCCTCCATCAGTTTCTGAAACTCCTCCTAAACCTCCTTCCTCTGATGTTCCCCCTCCATCCACATTGCCTTCAACTCCTCCTTCAGACCCTTCAGGATCTTCACCTCCAGCTTCTTTGCCTGATCCCCCAACTAATAAAACAGTGGTGGGGGGTCCGAAGGTGTCGCTACCCTCTCTTCCAACTGAGAAACCCACTGCTAGACCTACTAATGATGGTACTAACAGTATGTCTTCAAACAACACACCTTCACATTCTGGAGGGTTGAGCACTGGAGGATCTGTGGCTATTGGAATTGTAGTTGGTTTTATTGTCCTCAGCCTTCTTGTTATGGCTGTGTGGTTTGCACAGAAGAAAAAGAAGAAGGGAACAGGATCAAGAGGTAGTTATGCTGCTCCTTCTCCATTTACCTCATCCCACAATTCAGGTACCTTATTCTTGAGGCCGCAGTCTCCGGCCAACTTTTTAGGTAGTGGCTCTGGTAGTGATTTTGTATATTCTCCATCAGAGCCTGGTGGTGTAAGTAGTTCAAGATCATGGTTCACATATGAAGAACTTATTCAAGCTACAAATGGGTTTTCAGCACAAAATTTGTTGGGAGAAGGTGGATTTGGCTGTGTTTATAAAGGTTTGCTGATAGATGGAAGAGAAGTAGCTGTGAAACAGCTCAAAATTGGTGGTGGGCAAGGGGAACGCGAATTCAGGGCAGAAGTTGAGATTATTAGCCGTGTACATCATCGTCATCTGGTTTCTTTAGTTGGTTACTGTATATCCGAGCATCAGAGATTGCTTGTATATGACTATGTTCCCAACGATACTCTTCATTACCATCTCCACGGTGAAAATAGACCAGTTCTAGATTGGCCTACCAGAGTCAAGGTTGCTGCTGGTGCAGCTCGTGGAATAGCTTACTTGCATGAAGACTGTCATCCACGCATTATTCATCGAGATATTAAGTCATCAAACATCCTACTTGATCTCAACTATGAAGCTCAAGTTTCGGACTTTGGGCTTGCAAAATTGGCATTAGATTCAAATACACATGTAACTACACGTGTAATGGGAACCTTTGGGTACATGGCACCAGAATATGCGACAAGTGGAAAACTTACTGAAAAGTCTGATGTATATTCTTTTGGGGTTGTGCTTTTGGAGCTAATTACAGGTCGGAAGCCTGTAGATGCATCTCAACCAATTGGTGATGAGAGCCTGGTTGAATGGGCTCGACCTCTGTTGACGGAAGCACTTGACAATGAGGACTTTGAAATTTTGGTGGATCCAAGACTGGGGAAGAACTACGATAGAAATGAAATGTTTCGGATGATCGAGGCTGCCGCAGCCTGTGTACGCCACTCATCGGTGAAGAGACCACGCATGAGTCAGGTGGTGAGAGCTTTAGATTCCTTGGATGAGTTTACGGATCTCAATAACGGAATGAAACCGGGACAGAGTTCGGTGTTTGATTCGGCGCAGCAATCTGCACAAATCAGAATGTTTAGGAGGATGGCTTTTGGGAGCCAAGATAGTTCCGGTTTCTTCAATGAGTCTCAGAGTAGCTGGAGGAGTAGAGATCACGACCCAACAACTGTCTTCTCCCAAAATAAAACTGGGCATGGGAACGTTTGA 2271 0.4443 MASANPSPNASPVAVPPALGAILSPPPSSSSPTNTSTPPSPPSSSQPNQTQTQTQTPNSPAPSSPSDPSAPPPSPPQAVPLTPPPSISLSPPPSSTPPPTLPPPSPPDSPPPLPPASPTPPVTTSPPSPPVTTSPPSPPATTSPPPAETPPSLPNLSPPSPPAGSPPPQSPPTTIPPPSRPISPSPPPPANFPRPPTTRTPPEKENPPKTTPSHASPPSVSETPPKPPSSDVPPPSTLPSTPPSDPSGSSPPASLPDPPTNKTVVGGPKVSLPSLPTEKPTARPTNDGTNSMSSNNTPSHSGGLSTGGSVAIGIVVGFIVLSLLVMAVWFAQKKKKKGTGSRGSYAAPSPFTSSHNSGTLFLRPQSPANFLGSGSGSDFVYSPSEPGGVSSSRSWFTYEELIQATNGFSAQNLLGEGGFGCVYKGLLIDGREVAVKQLKIGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISEHQRLLVYDYVPNDTLHYHLHGENRPVLDWPTRVKVAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDLNYEAQVSDFGLAKLALDSNTHVTTRVMGTFGYMAPEYATSGKLTEKSDVYSFGVVLLELITGRKPVDASQPIGDESLVEWARPLLTEALDNEDFEILVDPRLGKNYDRNEMFRMIEAAAACVRHSSVKRPRMSQVVRALDSLDEFTDLNNGMKPGQSSVFDSAQQSAQIRMFRRMAFGSQDSSGFFNESQSSWRSRDHDPTTVFSQNKTGHGNV 756
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02532 756 MobiDBLite consensus disorder prediction 61 258 - -
Gma18g02532 756 ProSitePatterns Protein kinases ATP-binding region signature. 414 436 IPR017441 GO:0005524
Gma18g02532 756 MobiDBLite consensus disorder prediction 338 358 - -
Gma18g02532 756 MobiDBLite consensus disorder prediction 729 756 - -
Gma18g02532 756 SMART serkin_6 408 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02532 756 ProSiteProfiles Protein kinase domain profile. 408 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02532 756 MobiDBLite consensus disorder prediction 46 60 - -
Gma18g02532 756 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 110 730 - -
Gma18g02532 756 MobiDBLite consensus disorder prediction 1 304 - -
Gma18g02532 756 MobiDBLite consensus disorder prediction 278 304 - -
Gma18g02532 756 MobiDBLite consensus disorder prediction 31 45 - -
Gma18g02532 756 ProSitePatterns Serine/Threonine protein kinases active-site signature. 528 540 IPR008271 GO:0004672|GO:0006468
Gma18g02532 756 Pfam Protein tyrosine and serine/threonine kinase 411 681 IPR001245 GO:0004672|GO:0006468
Gma18g02532 756 SUPERFAMILY Protein kinase-like (PK-like) 386 681 IPR011009 -
Gma18g02532 756 Gene3D Phosphorylase Kinase; domain 1 385 483 - -
Gma18g02532 756 Gene3D Transferase(Phosphotransferase) domain 1 484 700 - -
Gma18g02532 756 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 110 730 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma18g02532 Gma-Chr18 59389061 59394948 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02532 278 740 Trihelix Transcription Factor Family AT5G38560 70.402 0.0 686
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Gma18g02532 PK_Tyr_Ser-Thr 6.9e-46 CL0016
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02532 18 59389061 59394948 Gma08g02382 08 23383907 23388921 GST