Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma18g02532 | ATGGCTTCAGCAAACCCTTCCCCAAATGCTTCCCCTGTTGCAGTGCCTCCAGCACTTGGTGCTATTTTATCACCACCTCCTTCTTCATCTTCTCCAACAAACACTTCCACCCCACCATCACCTCCCAGTTCTTCTCAGCCTAATcaaacacaaacacaaacacaaacacCCAATTCCCCTGCTCCTTCATCTCCTTCTGACCCTTCTGCTCCACCTCCTTCTCCTCCTCAGGCAGTGCCATTAACCCCTCCTCCTTCCATATCACTGTCTCCTCCACCATCATCTACACCACCACCAACTTTGCCCCCTCCATCACCACCTGATTCTCCACCACCATTGCCACCTGcatctccaaccccaccagttacaacatctcccccctcaccaccagttacaacatctcccccctcaccaccagctaccacatcccctcctcCAGCTGAAACTCCACCTTCCCTTCCAAATTTGTCTCCACCATCTCCACCAGCCGGTTCCCCTCCTCCTCAATCACCTCCCACAACAATTCCACCTCCCTCTCGACCGATTTCGCCATCTCCTCCTCCTCCGGCCAATTTTCCAAGGCCACCAACCACTAGAACTCCTCCAGAGAAAGAAAATCCACCAAAAACTACTCCTTCACATGCATCTCCTCCATCAGTTTCTGAAACTCCTCCTAAACCTCCTTCCTCTGATGTTCCCCCTCCATCCACATTGCCTTCAACTCCTCCTTCAGACCCTTCAGGATCTTCACCTCCAGCTTCTTTGCCTGATCCCCCAACTAATAAAACAGTGGTGGGGGGTCCGAAGGTGTCGCTACCCTCTCTTCCAACTGAGAAACCCACTGCTAGACCTACTAATGATGGTACTAACAGTATGTCTTCAAACAACACACCTTCACATTCTGGAGGGTTGAGCACTGGAGGATCTGTGGCTATTGGAATTGTAGTTGGTTTTATTGTCCTCAGCCTTCTTGTTATGGCTGTGTGGTTTGCACAGAAGAAAAAGAAGAAGGGAACAGGATCAAGAGGTAGTTATGCTGCTCCTTCTCCATTTACCTCATCCCACAATTCAGGTACCTTATTCTTGAGGCCGCAGTCTCCGGCCAACTTTTTAGGTAGTGGCTCTGGTAGTGATTTTGTATATTCTCCATCAGAGCCTGGTGGTGTAAGTAGTTCAAGATCATGGTTCACATATGAAGAACTTATTCAAGCTACAAATGGGTTTTCAGCACAAAATTTGTTGGGAGAAGGTGGATTTGGCTGTGTTTATAAAGGTTTGCTGATAGATGGAAGAGAAGTAGCTGTGAAACAGCTCAAAATTGGTGGTGGGCAAGGGGAACGCGAATTCAGGGCAGAAGTTGAGATTATTAGCCGTGTACATCATCGTCATCTGGTTTCTTTAGTTGGTTACTGTATATCCGAGCATCAGAGATTGCTTGTATATGACTATGTTCCCAACGATACTCTTCATTACCATCTCCACGGTGAAAATAGACCAGTTCTAGATTGGCCTACCAGAGTCAAGGTTGCTGCTGGTGCAGCTCGTGGAATAGCTTACTTGCATGAAGACTGTCATCCACGCATTATTCATCGAGATATTAAGTCATCAAACATCCTACTTGATCTCAACTATGAAGCTCAAGTTTCGGACTTTGGGCTTGCAAAATTGGCATTAGATTCAAATACACATGTAACTACACGTGTAATGGGAACCTTTGGGTACATGGCACCAGAATATGCGACAAGTGGAAAACTTACTGAAAAGTCTGATGTATATTCTTTTGGGGTTGTGCTTTTGGAGCTAATTACAGGTCGGAAGCCTGTAGATGCATCTCAACCAATTGGTGATGAGAGCCTGGTTGAATGGGCTCGACCTCTGTTGACGGAAGCACTTGACAATGAGGACTTTGAAATTTTGGTGGATCCAAGACTGGGGAAGAACTACGATAGAAATGAAATGTTTCGGATGATCGAGGCTGCCGCAGCCTGTGTACGCCACTCATCGGTGAAGAGACCACGCATGAGTCAGGTGGTGAGAGCTTTAGATTCCTTGGATGAGTTTACGGATCTCAATAACGGAATGAAACCGGGACAGAGTTCGGTGTTTGATTCGGCGCAGCAATCTGCACAAATCAGAATGTTTAGGAGGATGGCTTTTGGGAGCCAAGATAGTTCCGGTTTCTTCAATGAGTCTCAGAGTAGCTGGAGGAGTAGAGATCACGACCCAACAACTGTCTTCTCCCAAAATAAAACTGGGCATGGGAACGTTTGA | 2271 | 0.4443 | MASANPSPNASPVAVPPALGAILSPPPSSSSPTNTSTPPSPPSSSQPNQTQTQTQTPNSPAPSSPSDPSAPPPSPPQAVPLTPPPSISLSPPPSSTPPPTLPPPSPPDSPPPLPPASPTPPVTTSPPSPPVTTSPPSPPATTSPPPAETPPSLPNLSPPSPPAGSPPPQSPPTTIPPPSRPISPSPPPPANFPRPPTTRTPPEKENPPKTTPSHASPPSVSETPPKPPSSDVPPPSTLPSTPPSDPSGSSPPASLPDPPTNKTVVGGPKVSLPSLPTEKPTARPTNDGTNSMSSNNTPSHSGGLSTGGSVAIGIVVGFIVLSLLVMAVWFAQKKKKKGTGSRGSYAAPSPFTSSHNSGTLFLRPQSPANFLGSGSGSDFVYSPSEPGGVSSSRSWFTYEELIQATNGFSAQNLLGEGGFGCVYKGLLIDGREVAVKQLKIGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISEHQRLLVYDYVPNDTLHYHLHGENRPVLDWPTRVKVAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDLNYEAQVSDFGLAKLALDSNTHVTTRVMGTFGYMAPEYATSGKLTEKSDVYSFGVVLLELITGRKPVDASQPIGDESLVEWARPLLTEALDNEDFEILVDPRLGKNYDRNEMFRMIEAAAACVRHSSVKRPRMSQVVRALDSLDEFTDLNNGMKPGQSSVFDSAQQSAQIRMFRRMAFGSQDSSGFFNESQSSWRSRDHDPTTVFSQNKTGHGNV | 756 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma18g02532 | 756 | MobiDBLite | consensus disorder prediction | 61 | 258 | - | - | |
Gma18g02532 | 756 | ProSitePatterns | Protein kinases ATP-binding region signature. | 414 | 436 | IPR017441 | GO:0005524 | |
Gma18g02532 | 756 | MobiDBLite | consensus disorder prediction | 338 | 358 | - | - | |
Gma18g02532 | 756 | MobiDBLite | consensus disorder prediction | 729 | 756 | - | - | |
Gma18g02532 | 756 | SMART | serkin_6 | 408 | 688 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma18g02532 | 756 | ProSiteProfiles | Protein kinase domain profile. | 408 | 688 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma18g02532 | 756 | MobiDBLite | consensus disorder prediction | 46 | 60 | - | - | |
Gma18g02532 | 756 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 | 110 | 730 | - | - | |
Gma18g02532 | 756 | MobiDBLite | consensus disorder prediction | 1 | 304 | - | - | |
Gma18g02532 | 756 | MobiDBLite | consensus disorder prediction | 278 | 304 | - | - | |
Gma18g02532 | 756 | MobiDBLite | consensus disorder prediction | 31 | 45 | - | - | |
Gma18g02532 | 756 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 528 | 540 | IPR008271 | GO:0004672|GO:0006468 | |
Gma18g02532 | 756 | Pfam | Protein tyrosine and serine/threonine kinase | 411 | 681 | IPR001245 | GO:0004672|GO:0006468 | |
Gma18g02532 | 756 | SUPERFAMILY | Protein kinase-like (PK-like) | 386 | 681 | IPR011009 | - | |
Gma18g02532 | 756 | Gene3D | Phosphorylase Kinase; domain 1 | 385 | 483 | - | - | |
Gma18g02532 | 756 | Gene3D | Transferase(Phosphotransferase) domain 1 | 484 | 700 | - | - | |
Gma18g02532 | 756 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 110 | 730 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma18g02532 | Gma-Chr18 | 59389061 | 59394948 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma18g02532 | 278 | 740 | Trihelix Transcription Factor Family | AT5G38560 | 70.402 | 0.0 | 686 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_PERK-1 | Gma18g02532 | PK_Tyr_Ser-Thr | 6.9e-46 | CL0016 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma18g02532 | 18 | 59389061 | 59394948 | Gma08g02382 | 08 | 23383907 | 23388921 | GST |