Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02510 ATGCAGGCCAGGGAGATCACAGGACTCAATTATTTACTCCCTTCAGACCCTTGTCCTTACCCTGGTCACTACAGCATGGTTCAGAACACCATCCCCACATTTCAACTCCACAAACTCTCAAACCAATTCTATGGTTTGCAGAATCCTCCTAAAGTGCTTGCAGACTTCAGCCCCCCTCAGTCCTCATGCATCAGCAGCAACTCAACCTCTGATGAAGCAGATGAGCAGCAGCAAAGCCTCATCAATGAGAGGAAGCACAGGAGGATGATATCGAACCGCGAGTCGGCGCGCCGGTCACGCATGAGGAAGCAGAAACACCTTGATGAACTGTGGTCACAGGTGGTTTGGCTCAGGAATGAAAACCACCAGCTAATGGACAAGCTGAACCATGTGTCTGCGTCACAAGATAAAGTTGTTCAAGAGAATGTTCAGCTGAGAGAAGAAGCCTCAGAACTTCGCCAAATGATATGTGACATGCAGCTACACAGTCCATACCACCCTCCTCCCTTGAGTCCCATTGATGATGATGTTTCTCCCTATGTCAAATCTGATTCCTCAATCACAGACTCTTTGGACCTGCTTGGTTGA 588 0.4847 MQAREITGLNYLLPSDPCPYPGHYSMVQNTIPTFQLHKLSNQFYGLQNPPKVLADFSPPQSSCISSNSTSDEADEQQQSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLMDKLNHVSASQDKVVQENVQLREEASELRQMICDMQLHSPYHPPPLSPIDDDVSPYVKSDSSITDSLDLLG 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02510 195 MobiDBLite consensus disorder prediction 55 80 - -
Gma18g02510 195 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 87 102 IPR004827 GO:0003700|GO:0006355
Gma18g02510 195 MobiDBLite consensus disorder prediction 55 76 - -
Gma18g02510 195 Gene3D - 82 138 - -
Gma18g02510 195 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 82 145 IPR004827 GO:0003700|GO:0006355
Gma18g02510 195 SUPERFAMILY Leucine zipper domain 84 132 IPR046347 GO:0003700|GO:0006355
Gma18g02510 195 Coils Coil 135 155 - -
Gma18g02510 195 CDD bZIP_plant_GBF1 85 132 IPR045314 GO:0003700|GO:0006355
Gma18g02510 195 PANTHER BZIP TRANSCRIPTION FACTOR 1 195 - -
Gma18g02510 195 MobiDBLite consensus disorder prediction 163 195 - -
Gma18g02510 195 Pfam bZIP transcription factor 84 131 IPR004827 GO:0003700|GO:0006355
Gma18g02510 195 MobiDBLite consensus disorder prediction 181 195 - -
Gma18g02510 195 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 195 IPR044521 -
Gma18g02510 195 SMART brlzneu 80 144 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02510 Gma-Chr18 59201077 59202031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02510 43 179 bZIP Transcription Factor Family AT3G30530 62.857 3.52e-51 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma18g02510 bZIP_1 1.9e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02510 - - gmx:780548 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02510 18 59201077 59202031 Gma08g02354 08 22976335 22977286 GST
Gma13g00358 13 15423594 15424491 Gma18g02510 18 59201077 59202031 PCT
Gma19g00357 19 5415503 5416374 Gma18g02510 18 59201077 59202031 PCT
Gma18g02510 18 59201077 59202031 Gma13g00358 13 15423594 15424491 PCT
Gma18g02510 18 59201077 59202031 Gma19g00357 19 5415503 5416374 PCT