Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02507 ATGACGATTAGTAGTCTTGCACCTAAGGCAGAGAGGAAGAAATCAAGGAAGAGCAAGGCAGTTGTTAATGAGAATGCACCCTTGTTGCCAAAAAGTCATGTTCAGGAGAGTGATGCTGGGTTTGATGATTTCAATGGAGCTTCATTTTCTGGGGCTGTTTTTAACTTGTCCACCACAATTATTGGTGCTGGCATCATGGCCTTGCCTGCAACCTTGAAACAGTTGGGGATGATACCTGGTCTTCTTGCCATCATCATCATGGCTTTGTTGACAGAGAAGTCAATTGAGCTTTTGATTCGGTTTACCCGGGCAGGGAAGTCTGTTTCTTATGCTGGTCTCATGGGGGATTCCTTTGGGAATTATGGAAAAGCTCTGGTGCAGATATGTGTTATAATCAATAACATCGGTGTGCTGATTGTTTACATGATTATAATTGGTGATGTGCTCTCTGGAACATCTTCAAGTGGAGATCATCACTATGGTATCCTTGAAGGATGGTTTGGTGTGCACTGGTGGACGGGGCGAACATTTGTTGTCCTTTTTACAACACTTGCCATATTTGCACCCCTTGCAAGCTTTAAGCGAATTGATTCATTGAGATTCACATCAGCCCTTTCAGTCGCACTTGCAGTTGTTTTTCTAGTCATTGCCGTGGGAATTGCAGTTGTCAAGATATTCAGTGGAGGCATTGCGATGCCCAGACTCTTCCCTGTCACTACTGATGTGGCATCATTCTTTAGACTATTCACTGTAGTTCCTGTGTTTGTGACTGCATATATCTGCCACTACAATGTTCACAGCATAGACAATGAACTTGAGGACTCCTCACAGATGCGAGGGGTAGTACAAACCGCCCTTGTTCTATGCTCTTCAGTGTACGTAATGATAAGCTTCTTTGGGTTCCTCCTATTTGGCGAAGGAACTCTTGATGATGTGCTGGCCAATTTCGATACCAATCTTGGAATTCCTTTCGGTTCTGTGCTCAATGATGCTGTTCGTATAAGCTACGCCGCACACCTGATGCTTGTATTTCCAGTTGTCTTCTTTCCATTGCGTCTCAACATAGATGGCCTCCTCTTCTCTAAATCAAGGCCTCTGGTTCTGGATAACTTCAGATTTGCATCACTCACTATTGCCCTTATTGGTGTTATCTTCCTGGGAGCAAATTTCATACCTAGCATTTGGGATGCTTTCCAGTTTACTGGAGCAACTGCCGCAGTCTGTATAGGATTCATTTTTCCAGCTGCCATCACTCTTAGGGACCGCTACAACATTGCAACTAAATCAGACAAGATTTTGTGTGTCATTATGATAGTCCTCGCAGTCTTCTCAAACGTTGTGGCTATATACAGTGATGCATATGCCTTGATCAAGCAGAACAAAACTTCACGAGAATGA 1398 0.4363 MTISSLAPKAERKKSRKSKAVVNENAPLLPKSHVQESDAGFDDFNGASFSGAVFNLSTTIIGAGIMALPATLKQLGMIPGLLAIIIMALLTEKSIELLIRFTRAGKSVSYAGLMGDSFGNYGKALVQICVIINNIGVLIVYMIIIGDVLSGTSSSGDHHYGILEGWFGVHWWTGRTFVVLFTTLAIFAPLASFKRIDSLRFTSALSVALAVVFLVIAVGIAVVKIFSGGIAMPRLFPVTTDVASFFRLFTVVPVFVTAYICHYNVHSIDNELEDSSQMRGVVQTALVLCSSVYVMISFFGFLLFGEGTLDDVLANFDTNLGIPFGSVLNDAVRISYAAHLMLVFPVVFFPLRLNIDGLLFSKSRPLVLDNFRFASLTIALIGVIFLGANFIPSIWDAFQFTGATAAVCIGFIFPAAITLRDRYNIATKSDKILCVIMIVLAVFSNVVAIYSDAYALIKQNKTSRE 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02507 465 PANTHER AMINO ACID TRANSPORTER AVT6A 10 463 - -
Gma18g02507 465 Pfam Transmembrane amino acid transporter protein 47 450 IPR013057 -
Gma18g02507 465 PANTHER AMINO ACID TRANSPORTER 10 463 - -
Gma18g02507 465 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02507 Gma-Chr18 59160388 59164179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02507 3 465 Amino Acid or Auxin Permease AAAP Family AT3G30390 67.819 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02507 K14207 - gmx:100796345 868.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02507 18 59160388 59164179 Gma08g02351 08 22919968 22923277 GST
Gma19g00352 19 5333324 5338216 Gma18g02507 18 59160388 59164179 PCT
Gma18g02507 18 59160388 59164179 Gma19g00352 19 5333324 5338216 PCT