Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02496 ATGGTTGATCAAGCTGATTTAGTTATCATTTGTGTCTCTGTTGGGGTGGCCCTTGGAGTTTTGATAGCTTATCTCATATATGTTGGCATAAGGTGCTACAAAAAGCGAGCTCATCTTAGCCGATCTGCGAACGAGCCTAGTTTAACAACTATCCCTATACGAACAAATGGATTAGAAACTAGCATTGACTTTAGTGCTTCTCTCACCAGTTCCATAGCCACTTCAAGGTCACCAAATCCTCACAAAAGCTCGCATTCAACTTGGTGGAGTCATCAGAATAAAGATGGTTTTGCTTCAGTATCAGGCATTCTGAAGTACTCATATAAAGAAATTCAAAAGGCTACACAAAACTTCACAAATACATTGGGAGAAGGATCCTTTGGCACAGTTTATAAAGCCATGATGCCTACAGGAGAGGTGGTAGCTGTGAAGATGCTTGGACCCAATTCCAAACAAGGGGAGAAAGAATTTCAAACAGAGGTGCTTCTGCTTGGAAGACTGCATCATCGGAATCTTGTAAATTTGTTAGGATACTGCATAGATAAAGGACAGTTTATGCTGGTTTACGAGTTCATGAGTAATGGAAGTTTAGAAAACCTTTTATATGGTGAAGAAAAGGAACTGAGTTGGGATGAAAGGCTGCAAATTGCTGTTGATATTTCACACGGAATAGAATACCTTCATGAAGGGGCAGTCCCACCCGTTGTTCATCGTGATTTGAAATCTGCTAATATATTGCTTGATCACTCAATGAGAGCTAAGGTTTCTGATTTTGGGCTCTCAAAGGAAGAGGTCTTTGATGGCCGTAATTCTGGCCTTAAAGGTACATATGGGTACATGGACCCTGCATACATTTCCTCAAGCAAGTTCACAGTGAAGAGTGACATTTACAGTTTTGGTATAATAATTTTTGAGTTGATCACTGCCATCCACCCACATCAAAATTTGATGGAATATATCCATCTTGCTGCAATGGATTATGATGGTGTAGATGGGATTCTTGACAAGCAACTTGTGGGAAAATGCAATCTTGAAGAAGTGAGACAGCTTGCTAAAATTGCACACAAATGTTTGCACAAATCACCTAGGAAACGCCCCTCCATTGGTGAGGTTTCGCAGGGTATATTGAGGATTAAGCAAAGACGCCTCATGAAAGAAGACACCATGTCATTTGCAAGCAGCAACTTCTCCCGAAGTGTGAGTCAAATAGAGGAGCAACAGGTTGAATTAAGTAAAATAACCACCATGAACCACAGGGAAATGGGGTGA 1269 0.4082 MVDQADLVIICVSVGVALGVLIAYLIYVGIRCYKKRAHLSRSANEPSLTTIPIRTNGLETSIDFSASLTSSIATSRSPNPHKSSHSTWWSHQNKDGFASVSGILKYSYKEIQKATQNFTNTLGEGSFGTVYKAMMPTGEVVAVKMLGPNSKQGEKEFQTEVLLLGRLHHRNLVNLLGYCIDKGQFMLVYEFMSNGSLENLLYGEEKELSWDERLQIAVDISHGIEYLHEGAVPPVVHRDLKSANILLDHSMRAKVSDFGLSKEEVFDGRNSGLKGTYGYMDPAYISSSKFTVKSDIYSFGIIIFELITAIHPHQNLMEYIHLAAMDYDGVDGILDKQLVGKCNLEEVRQLAKIAHKCLHKSPRKRPSIGEVSQGILRIKQRRLMKEDTMSFASSNFSRSVSQIEEQQVELSKITTMNHREMG 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02496 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Gma18g02496 422 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
Gma18g02496 422 PANTHER OS01G0750732 PROTEIN 9 419 - -
Gma18g02496 422 Pfam Protein tyrosine and serine/threonine kinase 118 372 IPR001245 GO:0004672|GO:0006468
Gma18g02496 422 Gene3D Phosphorylase Kinase; domain 1 81 191 - -
Gma18g02496 422 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 2 9 419 - -
Gma18g02496 422 CDD STKc_IRAK 122 378 - -
Gma18g02496 422 Gene3D Transferase(Phosphotransferase) domain 1 192 400 - -
Gma18g02496 422 ProSiteProfiles Protein kinase domain profile. 116 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02496 422 SMART serkin_6 116 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02496 422 SUPERFAMILY Protein kinase-like (PK-like) 85 372 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02496 Gma-Chr18 59067761 59072679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02496 76 398 Receptor kinase-like Gene Family AT4G02010 38.682 4.65e-70 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Gma18g02496 PK_Tyr_Ser-Thr 9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02496 - - gmx:100794239 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02496 18 59067761 59072679 Gma08g02342 08 22738333 22743291 GST
Gma18g02496 18 59067761 59072679 Gma19g00344 19 5163051 5168996 PCT