Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02478 atgtccaatggatctctagatagacacctactacgtgggaaactgtcatggaaaaaaagggtagagatttgcataggagtagcgtgtggattacactaccttcatgctggagccaagcgctccatctttcattgtatactcagagccagtaccattcttttggatgaagacaaggagccaaaactcgcaggattcggccttagcatacagggaccgcaatttaattcgaagaagccgaaacaaattaatgcagatcatattatggatactcttggttacatgcctttggaGACAGCTGAAATTAAGATTTTAATATCTAGTTGCACCAAAGGCATACAGAGGGGGAGTTTCATAGCTCTTGGACTAATCAATCCTTGTACTGGGGAGCTAACAGCATTGATGATACTTTCTCCTGGTGTTGAAAAGACATGGTGTGTATTATGTGCATTGTCATCATTCAAGATTCAAACCTCAGTTTATTCCATCAATGCTACAACTCAGAGTGGAGATTTGAATCGTGATATATTTTATAAGAAAAAGGATTATACATTGACACAGCATAATCATCTCTTGCTTCCAAATTTTGACTATGAGACTGACTGCCAAGACCTCACCAATACTTGGAACAAACCCAAAAACCAGAACTCTACATATTATGCTACAATTCTGCAGGACTGCCCGCCAAATGTTGGCCAATTCTCAGCATATTTTAATTGTTCATACAAAGAAAGAAGCAAATTGTGTAGCACATAG 753 0.2297 MSNGSLDRHLLRGKLSWKKRVEICIGVACGLHYLHAGAKRSIFHCILRASTILLDEDKEPKLAGFGLSIQGPQFNSKKPKQINADHIMDTLGYMPLETAEIKILISSCTKGIQRGSFIALGLINPCTGELTALMILSPGVEKTWCVLCALSSFKIQTSVYSINATTQSGDLNRDIFYKKKDYTLTQHNHLLLPNFDYETDCQDLTNTWNKPKNQNSTYYATILQDCPPNVGQFSAYFNCSYKERSKLCST 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02478 250 ProSiteProfiles Protein kinase domain profile. 1 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02478 250 SUPERFAMILY Protein kinase-like (PK-like) 1 100 IPR011009 -
Gma18g02478 250 PANTHER TYROSINE KINASE FAMILY PROTEIN 1 102 - -
Gma18g02478 250 Pfam Protein tyrosine and serine/threonine kinase 1 73 IPR001245 GO:0004672|GO:0006468
Gma18g02478 250 Gene3D Transferase(Phosphotransferase) domain 1 1 109 - -
Gma18g02478 250 PANTHER OS07G0166700 PROTEIN 1 102 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02478 Gma-Chr18 58845283 58847616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02478 1 75 Receptor kinase-like Gene Family AT2G39360 45.570 3.34e-17 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma18g02478 PK_Tyr_Ser-Thr 1.6e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02478 - - pvu:PHAVU_008G028400g 139.813