Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02473 ATGAGCAATTTCCAAATGTTTCGGCACATCATGAATCCTGGATGGACCTTGGGATGGACATGGGCAAAGAAGGAAGTTATATGGTCCATGGTAGGAGCTCAAACCACAGAACAAGGAGACTGTTCTAAGTTCAAAGGCAATGTACCTCACTGCTGCAAGAAAACTCCCACAGTTGTAGACTTGCTCCCTGGTGTGCCTTACAACCAGCAATTCTCAAACTGTTGTAAGGGTGGAGTGGTGGCAGCATGGGGCCAAGACCCTTCATCAGCAGTCTCATCCTTCCAAGTGAGTATTGGGCTAGCCGGTACTTCAAACAAGACAGTTAAACTCCCCAAGAACTTCACTCTCTTGGGTCCAGGACCAGGCTACACTTGTGGTCCTGCCAAGGTTGTTCCTTCCACCGTTTTCCTTACACCTGACAAGCGCCGCAAGACTCAAGCACTAATGACATGGAATGTTACTTGCACATACTCACAATTTCTGGCTAGAAAGAACCCGGGTTGCTGTGTATCTCTGTCATCCTTCTACAATGAGACCATTACCCCTTGCCCCACTTGTGCCTGTGGCTGCCAGAACAGGAGGAACTGTGTCAAGAGTGACTCTAAACGTATCAACATGGTGGGGATTCACACTCCAAAGAAAGACAATGAACCATTGCTACAGTGCACTCATCATATGTGTCCAATAAGGGTGCACTGGCACGTGAAGCTCAACTATAAGGACTATTGGCGAGTCAAGGTTGCTGTGACGAATTTCAACTACAGGATGAATTACTCCCTCTGGACTCTTGCTGTTCAGCATCCAAATCTTAACAATGTCACCCAAGTTTTTAGCTTTGATTACAAGCCTTTACTTCCCTATGAGTCCATAAATGACACTGGTATGTTCTATGGCATGAAATACTTTAATGATCTCTTAATGGAAGCTGGACCAACTGGGAATGTTCAATCAGAAATTCTTCTTCAGAAGAACCAGGAAACATTCACATTCAAGCAAGGATGGGCATTTCCTCGCAAGGTCTACTTTAATGGTGAGGAATGCATGCTGCCACCTCCTGATAGCTACCCGATCCTCCCTAATTCTGCCCCTGTGAACTTATTAAACTTCCCAGCATTCATTTTCACAATGCTTGTCATGATAGCTGTTTGGTGA 1152 0.4549 MSNFQMFRHIMNPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPSSAVSSFQVSIGLAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVVPSTVFLTPDKRRKTQALMTWNVTCTYSQFLARKNPGCCVSLSSFYNETITPCPTCACGCQNRRNCVKSDSKRINMVGIHTPKKDNEPLLQCTHHMCPIRVHWHVKLNYKDYWRVKVAVTNFNYRMNYSLWTLAVQHPNLNNVTQVFSFDYKPLLPYESINDTGMFYGMKYFNDLLMEAGPTGNVQSEILLQKNQETFTFKQGWAFPRKVYFNGEECMLPPPDSYPILPNSAPVNLLNFPAFIFTMLVMIAVW 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02473 383 Pfam COBRA-like protein 1 158 IPR006918 GO:0010215|GO:0031225
Gma18g02473 383 PIRSF COBRA 1 383 IPR006918 GO:0010215|GO:0031225
Gma18g02473 383 PANTHER COBRA-LIKE PROTEIN 2 380 - -
Gma18g02473 383 PANTHER PROTEIN COBRA 2 380 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02473 Gma-Chr18 58793025 58795582 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02473 1 371 COBRA Gene Family AT5G60920 67.725 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02473 - - gmx:100784352 820.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02473 18 58793025 58795582 Gma08g02309 08 22275843 22278007 GST
Gma18g02473 18 58793025 58795582 Gma19g00316 19 4359465 4362164 PCT