Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02472 ATGGGCTTCTCTCTGTTACCAAAAGCAACTCCTTGCATTTTGTTCTTGGCTCTGCTGTTTTGTACTTGCTTCACTTCAACAGATGCTTATGATCCGCTTGACCCAAATGGGAATATCACAATCAAATGGGATATTATAAGCTGGACCCCTGATGGATATGTGGCTGTTGTTACGATGAACAACTTCCAACAATATCGTCATATCGCTTCACCTGGCTGGTCAATGGGATGGACATGGGCGAAAAAGGAGGTAATATGGAGCATGATGGGAGGGCAGACCACTGAACAAGGGGATTGTTCAAAATTTAAGGGTGGTATTCCACATTGCTGTAAGAAAGATCCGACAGTTGTAGATTTGCTTCCTGGAACACCTTACAATCAACAAATTGCAAATTGCTGCAAAGGTGGGGTGCTCAGTTCATGGGCGCAGGATCCAACCAATGCAGTTTCATCATTTCAAGTCAGTGTTGGTAGAGCTGGAACCACAAACAAAACTGTCAAAGTCCCCAAAAACTTCACCTTGAAAGCACCAGGACCAGGTTATACTTGTGGGCCAGCCAAGATTGTGGCACCCACTAAATTCATTACTTCAGACAAAAGGAGAGTGACCCAAGCACTGATGACATGGAATGTGACATGCACATACTCACAATTTCTGGCTCAGAAAACTCCCTCTTGCTGTGTCTCACTTTCATCTTTCTATAATGATACCCTTGTTCCCTGCCCAACATGTGCATGTGGCTGCCAAAGTAACTCGTCTCGGTCAGGGACCTGTGTAGATCCAGATACACCACATTTGGCATCAGTTGTTGCTGGCTCTGGGAAGAATAACTTTTCACCTTTGGTTCAATGTACTAGACATATGTGCCCAGTCCGTATCCACTGGCATGTTAAGCTTAACTACAAGGAGTACTGGCGTGTGAAGGTTACTATTACTAATTTTAATTACAGGATGAATTATTCTGAGTGGAACATGGTTGTTCAACATCCAAACTTTGACAATCTGACTCAGCTGTTCAGTTTCAACTACAAGTCATTGACTCCTTATGGTTCAATAAATGATACTGCAATGCTATGGGGAGTTAAGTTCTATAATGATTTTCTCAACCAAGCTGGCCCTAATGGCAATGTTCAATCAGAGCTACTCTTCCGAAAGGATAAAGCAACTTTTACTTTTGATAAGGGTTGGGCTTTTCCTCGAAGGGTCTACTTCAACGGTGACAACTGTGTAATGCCACCACCTGATTCTTATCCGTGGTTACCTAATGCTGGTGCTAGGCAAGAGGTTTCCTTGTTTTCTTTAGTGATAGCATCTTTGGTAGCCTTGGTATTTTATGCTCACGCATAA 1347 0.4298 MGFSLLPKATPCILFLALLFCTCFTSTDAYDPLDPNGNITIKWDIISWTPDGYVAVVTMNNFQQYRHIASPGWSMGWTWAKKEVIWSMMGGQTTEQGDCSKFKGGIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLSSWAQDPTNAVSSFQVSVGRAGTTNKTVKVPKNFTLKAPGPGYTCGPAKIVAPTKFITSDKRRVTQALMTWNVTCTYSQFLAQKTPSCCVSLSSFYNDTLVPCPTCACGCQSNSSRSGTCVDPDTPHLASVVAGSGKNNFSPLVQCTRHMCPVRIHWHVKLNYKEYWRVKVTITNFNYRMNYSEWNMVVQHPNFDNLTQLFSFNYKSLTPYGSINDTAMLWGVKFYNDFLNQAGPNGNVQSELLFRKDKATFTFDKGWAFPRRVYFNGDNCVMPPPDSYPWLPNAGARQEVSLFSLVIASLVALVFYAHA 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02472 448 PANTHER PROTEIN COBRA 7 447 IPR006918 GO:0010215|GO:0031225
Gma18g02472 448 PIRSF COBRA 3 448 IPR006918 GO:0010215|GO:0031225
Gma18g02472 448 Pfam COBRA-like protein 53 216 IPR006918 GO:0010215|GO:0031225
Gma18g02472 448 PANTHER COBRA-LIKE PROTEIN 7 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02472 Gma-Chr18 58789363 58792650 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02472 1 448 COBRA Gene Family AT3G02210 73.289 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02472 - - gmx:100783820 956.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02472 18 58789363 58792650 Gma08g02308 08 22271886 22275072 GST
Gma19g00316 19 4359465 4362164 Gma18g02472 18 58789363 58792650 PCT
Gma18g02472 18 58789363 58792650 Gma13g00383 13 15783072 15787098 PCT
Gma18g02472 18 58789363 58792650 Gma19g00315 19 4354491 4358891 PCT