Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02471 ATGGGCTTCTCTCAGTTACCCAAAGCAACTCCTAGCATTTTGTTCTTGGTTCTGCTGTCTTGTACTTGCTTCACTTCAACAGATGCTTATGATCCGCTTGACCCAAATGGGAATATAACAATCAAATGGGATGTTATATCCTGGACCCCTGATGGATATGTAGCTGTTGTTACAATGAACAACTTCCTAGCATTTCGTCACATCCCTTCACCTGGCTGGTCAATGAGATGGACATGGGCCAAAAAGGAGGTAATATGGAACATGGTGGGAGGGCAGGCCACAGAACAAGGGGATTGCTCAAAATTTAAGGGAAATATTCCACATTCCTGTAAGAAAAATCCCACAGTTGTAGATTTGCTTCCTGGAACACCTTACAATCAACAAGTTGCAAATTGCTGCAAAGGTGGAGTGCTCACTACATTGGTGCAGGATCCAACCAAAGCAGCTGCATCATTTCAAGTCAGTGTTGGTAGAGCTGGAACCACAAACAGAACTGTCAAACTCCCAAAAAACTTCACCTTGAAAGCACCGGGACCAGGTTATACTTGTGGGCCAGCTAAGATTGTGAGACCCACTAAATTCATTACTCCAGACAAAAGGAGAGTGACCGTAGCAATGATGACATGGAAAGTGGTATGCACATACTCACAATTTCTGGTTCGTAAAACTCCAACTTGCTGTGTCACACTTTCATCTTTCCATAATAATACTGTTGTGCCCTGCCCAACATGTTCATGTGGCTGCCAAAGGAACTCATCTCGGTCAAGGAGATGTGTAAATCCAGGTACACCACATTTGGCCTCTAACGTTACTAGCTCTGGGACGAATAATTTGTCACCTTTGGTTCAATGTACTAAGCATATGTGCCCAACCCAAGTTCACTGGCACGTTATGCGAAACTCCAAGAAATACTGGCGTGTGAAGGTTACTGTTACTAATTTTAGTTACAGGATGAATTATTCTGACTGGAACTTGCTTGTTCAACACCATAACTTCAACAATCGGACTCAAGTGTTTGGTTTCAACTACAAGTTACTGGCTTTGGATGCATATACAAATGATATAGCAATGCTGTGGGGAATTAAGTCCCGTCATAATGACATTCTCAACCAAGCTGGCCCTAAAGGCAATGTTCAAGCAGAGCTACTCTTCAGAAAGGATAAAGCAACTTTTACTTTTGATAAGGGTTGGGCTTTTCCTCGAAGGATCTACTTCAATGGTGACATATGTGTAATGCCACCACCTGATGCTTATCCATTTTAG 1263 0.4268 MGFSQLPKATPSILFLVLLSCTCFTSTDAYDPLDPNGNITIKWDVISWTPDGYVAVVTMNNFLAFRHIPSPGWSMRWTWAKKEVIWNMVGGQATEQGDCSKFKGNIPHSCKKNPTVVDLLPGTPYNQQVANCCKGGVLTTLVQDPTKAAASFQVSVGRAGTTNRTVKLPKNFTLKAPGPGYTCGPAKIVRPTKFITPDKRRVTVAMMTWKVVCTYSQFLVRKTPTCCVTLSSFHNNTVVPCPTCSCGCQRNSSRSRRCVNPGTPHLASNVTSSGTNNLSPLVQCTKHMCPTQVHWHVMRNSKKYWRVKVTVTNFSYRMNYSDWNLLVQHHNFNNRTQVFGFNYKLLALDAYTNDIAMLWGIKSRHNDILNQAGPKGNVQAELLFRKDKATFTFDKGWAFPRRIYFNGDICVMPPPDAYPF 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02471 420 PIRSF COBRA 4 420 IPR006918 GO:0010215|GO:0031225
Gma18g02471 420 PANTHER PROTEIN COBRA 7 420 IPR006918 GO:0010215|GO:0031225
Gma18g02471 420 Pfam COBRA-like protein 53 216 IPR006918 GO:0010215|GO:0031225
Gma18g02471 420 PANTHER COBRA-LIKE PROTEIN 7 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02471 Gma-Chr18 58779558 58783009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02471 12 420 COBRA Gene Family AT3G02210 67.805 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02471 - - gmx:112997606 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02471 18 58779558 58783009 Gma08g02307 08 22239024 22260755 GST
Gma13g00383 13 15783072 15787098 Gma18g02471 18 58779558 58783009 PCT
Gma19g00315 19 4354491 4358891 Gma18g02471 18 58779558 58783009 PCT