Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02470 ATGGCCCAGTCTTTCGGCCAGACCGAGATCAACTGGGACAAGCTTGATAAAACTAGGTTCTATGTCGTAGGAGCTGGACTCTTTACAGGTGTTTCGGTGGCACTTTACCCCGTTTCTGTTGTGAAAACTAGGCTGCAGGTTGCCACAAGGGATGCTGTAGAGAGAAATGTGTTTTCTGTTGCAAAAGGACTACTTAAAACAGATGGCATCCCTGGTTTGTATAGAGGGTTTGGCACGGTTATCACTGGTGCAATTCCTGCCAGAATCATATTCCTCTCCACTCTAGAGACCACAAAGGTGGCTGCCTTCAGAATGCTTGAACCATTTAGACTATCTGAAACTTCTCAGGCTGCCATTGCAAATGGAGTTGCAGGCATGACATCATCGCTTTTTGCTCAATCTGTGTTTGTACCAATTGATGTGGTTAGCCAAAAGTTGATGGTGCAAGGATACTCAGGCCATGCCCAATATAGCGGGGGTCTGGATGTTGTTCGCCAGGTTTTAAGGACTGATGGCATACGGGGATTGTATCGAGGGTTTGGTCTGTCTGCTATTACTTATGCCCCTGCCAGTGCAGTATGGTGGGCAAGTTATGGTTCAAGCCAACGCTTCATTTGGAGATTCCTGGACCATGGTGCCAAATATGATGAAGTCGCTCCTAGTCTGCAGAAAATTATGTTAGTTCAGGCTACTGGAGGGATTATTGCTGGTGCAACTTCATCCTGCATTACAACCCCATTGGATACTATCAAGACACGATTGCAGGTAATGGGACATGAAAATAGAAGCTCTATAAAACAAGTTGCTAAAGATTTAATCAATGAAGATGGTTGGAGAGGCTTTTATAGAGGGTTTGGTCCAAGATTTTTTAGCATGTCAGCATGGGGTACTTCAATGATATTGACTTATGAGTATCTGAAACGCGTATGCTCAAAAGATGAATAG 945 0.4444 MAQSFGQTEINWDKLDKTRFYVVGAGLFTGVSVALYPVSVVKTRLQVATRDAVERNVFSVAKGLLKTDGIPGLYRGFGTVITGAIPARIIFLSTLETTKVAAFRMLEPFRLSETSQAAIANGVAGMTSSLFAQSVFVPIDVVSQKLMVQGYSGHAQYSGGLDVVRQVLRTDGIRGLYRGFGLSAITYAPASAVWWASYGSSQRFIWRFLDHGAKYDEVAPSLQKIMLVQATGGIIAGATSSCITTPLDTIKTRLQVMGHENRSSIKQVAKDLINEDGWRGFYRGFGPRFFSMSAWGTSMILTYEYLKRVCSKDE 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02470 314 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 7 314 - -
Gma18g02470 314 Pfam Mitochondrial carrier protein 27 100 IPR018108 -
Gma18g02470 314 Pfam Mitochondrial carrier protein 228 313 IPR018108 -
Gma18g02470 314 Pfam Mitochondrial carrier protein 119 205 IPR018108 -
Gma18g02470 314 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Gma18g02470 314 PRINTS Mitochondrial carrier protein signature 177 195 IPR002067 GO:0055085
Gma18g02470 314 PRINTS Mitochondrial carrier protein signature 233 255 IPR002067 GO:0055085
Gma18g02470 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 17 101 IPR018108 -
Gma18g02470 314 SUPERFAMILY Mitochondrial carrier 13 306 IPR023395 -
Gma18g02470 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 116 204 IPR018108 -
Gma18g02470 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 309 IPR018108 -
Gma18g02470 314 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 7 314 - -
Gma18g02470 314 Gene3D Mitochondrial carrier domain 21 314 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02470 Gma-Chr18 58773309 58777900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02470 10 314 Chloroplast and Mitochondria Gene Families AT5G15640 73.290 3.54e-170 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02470 K15121 - gmx:100782750 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02470 18 58773309 58777900 Gma08g02306 08 22230742 22235589 GST
Gma13g00384 13 15788625 15794403 Gma18g02470 18 58773309 58777900 PCT
Gma19g00313 19 4336777 4341877 Gma18g02470 18 58773309 58777900 PCT
Gma18g02470 18 58773309 58777900 Gma13g00384 13 15788625 15794403 PCT
Gma18g02470 18 58773309 58777900 Gma19g00313 19 4336777 4341877 PCT