Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02466 ATGGCTCACTATCTGTACCAACGGGCCTCTGCCGCCACTTCTCAATCAAAGAAAGGAGAACTGCCACCAACAACTTTGATGAAGTCTTCGTGGGTTCTCGGCAAGGTATTATCTGGGAGGCACCCTTTGCTCCATTGGGAGGAGAAATCTGACGTGTACTCATTTGGGGTGATGCTGTTGGAGGTGTTATCTGGGAGGCACCCTTTGCTCCATTGGGAGGAGAAACAACGAATGTCACTTGCTAATTGGGCAAAACATTGCTATGAGAAGGGAACTCTGAGTGAGATTGTGGATTCAGAACTCAAGGGCCAGATAAAACCTCAATGTTTGAACAAATTTAGTGAGGTGGCACTGAGCTGTTTGCTTGAGGATGGGACTCGACGACCTTCCATGAAAGACATTGTTGGGGTGTTGGAGTTTGTTCTTCAGTTTCAGGATAGTGCTGTTAATTATGAAGATAGCAGTAGCCATAGTACTGTACCTCTTTCAGATTGTAGTGAGAACACTGGATCAAGCACGACAAGTGATGGAGATCGTAGCAATGGCAGGATGGAATCTTTTGTGTTGATCCCGGATGATGTTTTCTCTGAGACTAAGAATCCAAAGGGACGATGA 615 0.4585 MAHYLYQRASAATSQSKKGELPPTTLMKSSWVLGKVLSGRHPLLHWEEKSDVYSFGVMLLEVLSGRHPLLHWEEKQRMSLANWAKHCYEKGTLSEIVDSELKGQIKPQCLNKFSEVALSCLLEDGTRRPSMKDIVGVLEFVLQFQDSAVNYEDSSSHSTVPLSDCSENTGSSTTSDGDRSNGRMESFVLIPDDVFSETKNPKGR 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02466 204 PANTHER OS07G0166700 PROTEIN 48 171 IPR045272 GO:0004714|GO:0006468
Gma18g02466 204 ProSiteProfiles Protein kinase domain profile. 1 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02466 204 MobiDBLite consensus disorder prediction 155 204 - -
Gma18g02466 204 SUPERFAMILY Protein kinase-like (PK-like) 45 140 IPR011009 -
Gma18g02466 204 Gene3D Transferase(Phosphotransferase) domain 1 8 163 - -
Gma18g02466 204 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 48 171 - -
Gma18g02466 204 MobiDBLite consensus disorder prediction 155 181 - -
Gma18g02466 204 Pfam Protein tyrosine and serine/threonine kinase 46 136 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02466 Gma-Chr18 58752404 58753375 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02466 48 204 Receptor kinase-like Gene Family AT3G51550 41.899 9.43e-35 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gma18g02466 PK_Tyr_Ser-Thr 4.8e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02466 - - gmx:100779523 287.345