Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02450 ATGATTAAGAGCCCCAAAGAAGCAGATTTTCCATTAAAACAGGAGGGTCATTCTCAATCAATTACTGATCCTGAAAAGGCAAAGGCTTCAGCGAGCTCAGTAGCACAATGGCCAAGATTGAAAGATCCAAGGATTGTGCGAGTATCTAGAGCCTTTGGAGGAAAAGACAGGCACAGCAAGGTTTTCACAATAAGAGGGTTAAGAGACAGACGGGTGAGGCTATCAGTACCAACTGCCATCCAACTCTATGATCTTCAAGATAGGCTAGGGCTCAGTCAACCTAGCAAGGTTGTTGATTGGTTGCTCGATGCAGCTAAGCATGAAATTGATGAACTTCCACCACTTCCTGTTGTTCCTTCAGTGAATAACTTCACCCTTGGTCATCCATCTGCTGTTACCTCTAATGAAGCTACCACCTCAAATTCTCAGCCTAATGAGCAACTTCTTAATATCAACAGAAGCATTCAGTGGGAAGGTTCAAACCAGAATTCTACATGGAAATTAAAGCCTAAAGAAGTTTCACGAGAAATGATTAGCACTGATAAACCAAATTGGATAAGTAGAAGTGAAGAGGATAAGCAAGGAAGCAATAATGAAGGTCCTAGCACACGTGTTATACCAAATATTAATCTCTTACCAAGAGCAAATCTTAATCATCCTTCATTCTTGGGCTTGCTGAATACTATGCCACATGGTTACCAATGGGAACCTTCTGCTGGTGATGTTTCTCATCAGTTGGGAAACAATGGATTTGCAAACCAAACAGATATGCACAGCATTAACGTTGTACCTTTCCCAACATCAACATTGTCATTATCAACTGGGAATTCTCAAATTCTGCTATGTCCTCCAGGAACAGCACAACCATATTTCCCTTCACATGTTACAATGGACATGGATCCGAGACAAATCAACCACTATCAGATGTTGAGTTCAGGTTCTCAAAATCCATTGGCGAATTATCTCAATCATTCTTTCAGCTTGGCTATGATGACTCATAAACCTCTTCATTCACCCAACAGCAGCAAAAGCCCCTCCCACAAAGACCAAGATTTCCCTTCCAACTGA 1068 0.4148 MIKSPKEADFPLKQEGHSQSITDPEKAKASASSVAQWPRLKDPRIVRVSRAFGGKDRHSKVFTIRGLRDRRVRLSVPTAIQLYDLQDRLGLSQPSKVVDWLLDAAKHEIDELPPLPVVPSVNNFTLGHPSAVTSNEATTSNSQPNEQLLNINRSIQWEGSNQNSTWKLKPKEVSREMISTDKPNWISRSEEDKQGSNNEGPSTRVIPNINLLPRANLNHPSFLGLLNTMPHGYQWEPSAGDVSHQLGNNGFANQTDMHSINVVPFPTSTLSLSTGNSQILLCPPGTAQPYFPSHVTMDMDPRQINHYQMLSSGSQNPLANYLNHSFSLAMMTHKPLHSPNSSKSPSHKDQDFPSN 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02450 355 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 351 IPR005333 GO:0003700
Gma18g02450 355 MobiDBLite consensus disorder prediction 1 35 - -
Gma18g02450 355 MobiDBLite consensus disorder prediction 170 203 - -
Gma18g02450 355 MobiDBLite consensus disorder prediction 333 355 - -
Gma18g02450 355 MobiDBLite consensus disorder prediction 15 29 - -
Gma18g02450 355 Pfam TCP family transcription factor 54 179 IPR017887 -
Gma18g02450 355 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 1 351 - -
Gma18g02450 355 MobiDBLite consensus disorder prediction 334 355 - -
Gma18g02450 355 ProSiteProfiles TCP domain profile. 54 112 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02450 Gma-Chr18 58552105 58553172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02450 37 309 TCP Transcription Factor Family AT3G02150 40.138 4.42e-47 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma18g02450 TCP 4.5e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02450 - - gmx:100816424 703.36