Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02448 ATGGCTTCTCACAACATCAAAATCCACGACCACTTTAGCGTTTCCCCTCCCTCAGCAACAGcgacatccctctctctcaaattcttcgaccttttctggctcaggttccaccccgtggaacgcatcttcttctacacgcttccaacaccccaatcagacccatccattttctattccaaaatcgttccaaagctcaaaacctctctctctcacaccctccaacactttccccctctcgccggcaacgtggtttggcctcatgactccccaaaccccatcgtccaatacaccccaggcgacgccgtttcagtgctggtggctgaatccgaagctgacttcaaccacgtgcttgataactcaccccacgaagcatcggagtcacgttgtttagtaccccacttggattcatcggattctcatgcctctattgtctctcttcaaatcactctgttccccaacaaaggattcagcataggaatcagcacccaccattccgttcttgatggaaaatcttcgacccttttcatcaaggcttggtcatctctatgcaaaaccaacgatgatgaatcttcagagtcatcatcaccatctttggcgccagagttggttcctttctttgacagatcagtcatcaaaaccccaagtgacttggGCCTTAACTTGACAATCATTTGGACTGAGGTCTTAACCAAATTGTTCCCTACTGAAAACAGCGACGGGAGGTGCTTAAAGCTTGCACCTTTCCCTCCAAGACTCGAGGATCATGTTCGAGCTACGTTCGCGCTCACGAGAGCAGATTTGGAGAAGTTAAGGAAAAGGGTGTTGTCCAAATGGGACATTGTTGAAACAGGAGAAGAATCAGAGCCACCTAGGTTGTCGTCCTTTGTTCTCACATGTGCTTATGCGGTAGTTTGCATTGCGAAGGCCATTCATGAAGTTAAAAAGGAGAAAGAGAAGTTTTcttttgggttcacggtggattgcagggcgaggttggagccaccaatccctgacaactattttggtaactgtgtatggggccgtttggtggatgctgacccactggacttcataaaggaagaagcttttgttattattgcaaagagtattgatagtaaaataaaagagatgtcagaaaaggggatttttcatggggcggatagtgtgttttctaaacacgcgtctttggcaaaagagagagttgaaatcttgggagttgcagggtctaatcgatttggggtctatgggagtgattttggttgggggaagcctgctaaggtggagataacatcggtggatagagccttaaccattgggttggcagagagcaaggatgggaatggtggtgttgaagttgggcttgttcttaataaacatgtcatggaTCTATTTGCCACTTTGTTTCGTCATGGAGTGTCAGATGAGTAG 1428 0.131 MASHNIKIHDHFSVSPPSATATSLSLKFFDLFWLRFHPVERIFFYTLPTPQSDPSIFYSKIVPKLKTSLSHTLQHFPPLAGNVVWPHDSPNPIVQYTPGDAVSVLVAESEADFNHVLDNSPHEASESRCLVPHLDSSDSHASIVSLQITLFPNKGFSIGISTHHSVLDGKSSTLFIKAWSSLCKTNDDESSESSSPSLAPELVPFFDRSVIKTPSDLGLNLTIIWTEVLTKLFPTENSDGRCLKLAPFPPRLEDHVRATFALTRADLEKLRKRVLSKWDIVETGEESEPPRLSSFVLTCAYAVVCIAKAIHEVKKEKEKFSFGFTVDCRARLEPPIPDNYFGNCVWGRLVDADPLDFIKEEAFVIIAKSIDSKIKEMSEKGIFHGADSVFSKHASLAKERVEILGVAGSNRFGVYGSDFGWGKPAKVEITSVDRALTIGLAESKDGNGGVEVGLVLNKHVMDLFATLFRHGVSDE 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02448 475 Gene3D - 252 474 IPR023213 -
Gma18g02448 475 Gene3D - 2 234 IPR023213 -
Gma18g02448 475 Pfam Transferase family 22 466 - -
Gma18g02448 475 SUPERFAMILY CoA-dependent acyltransferases 291 439 - -
Gma18g02448 475 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 475 - -
Gma18g02448 475 PANTHER - 1 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02448 Gma-Chr18 58519734 58526763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02448 6 464 Monolignol Biosynthesis Gene Families AT5G48930 24.576 1.54e-17 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02448 - - gmx:100815354 931.398