Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02439 ATGGCTCAAAGACAGATCTTTGCTCATGTGGTGATTTTGTTGCTTATGGTCTTAGTTGGAGCCAGGTTTGCTAAAGCAGAAGGAGGAGGAGAAGCTGCTGATAGGATTTTGGAACTCCCTGGTCAGCCAAAAGTGTCATTTCAGCAGTTTTCTGGCTATGTTACTGTTAACAAGGTTGCTGGTAGAGCTCTCTTTTACTGGCTCACTGAAGCTGCCCAAAATCCTCTCACCAAACCTTTGGTCATTTGGCTCAATGGAGGTCCAGGATGTTCATCAGTGGCATATGGAGCATCTGAAGAGATTGGCCCATTTAGAATAAACAAAACAGCTTCTGGGCTATACATTAACAAGTTTTCGTGGAACACAGTGGCCAACCTATTGTTCTTGGAAGCTCCGGCCGGCGTAGGCTTCTCCTACGCCAACCGCTCCTCTGACCTCCTCAACACCGGTGACCGCCGCACCGCTCAAGATTCTCTGGAATTTGTTATACAATGGCTAGAACGATTCCCTCGTTACAAAAACCGGGAACTTTATATCACTGGAGAGAGCTATGCAGGCCATTATGTTCCTCAATTAGCCAAGGAAATCTTGACCTACAACGCAAAAACCAAGCACCCCATCAATCTCAAAGGAATCATGGTAGGAAATGCAGTGACAGACAACTACTATGATAACTTGGGCACAGTGACGTATTGGTGGAGCCATGCTATGATCTCCGACCAGACTTACCGGCAACTAATGAGTACATGTGATTTTCACAGGCAGAAGGAATCTGATGAGTGTGAGTCTGTGTATAGCTATGCCATGGATCAAGAGTTTGGTAATATTGATCAGTACAACATCTATGCTCCTCCATGCAACAACTCTGATGGTAGTAGTAGCTCTGCCAACCGCCGCACCATGCGTTTACCTCACCGACCCCATGTGGATTTTAGGCATTGGTCTGGTTATGATCCATGTACGGAAaagtatgcagagatttactacaacaggcctgatgttcagaaagcactccatgccAACAAAACCGGTATTCCTTATAGGTGGACTGCTTGCAGCGAGGTTTTGAATCGGAACTGGAATGATACTGATGTATCTGTTCTTCCAATTTATAGAGAATTGATAGCTCACGGAATAAGAGTTTGGGTGTTCAGTGGGGACGTGGACTCAGTGGTGCCTGTCACAGCAACAAGATATGCCCTTGCCCAGCTTAAGTTGTCAACTAAAATACCATGGTATCCTTGGTATGTCAAAAATCAGGTTGGAGGGTGGACAGAGGTGTACGAAGGGGTAACATTCGCGACAGTGAGAGGAGCAGGGCATGAAGTGCCACTATTCAAGCCCAGAGCAGCACTTCAGTTATTCAAATCATTCCTTGAAGGAAAGCCTCTTCCAAAGTCCTAG 1404 0.4423 MAQRQIFAHVVILLLMVLVGARFAKAEGGGEAADRILELPGQPKVSFQQFSGYVTVNKVAGRALFYWLTEAAQNPLTKPLVIWLNGGPGCSSVAYGASEEIGPFRINKTASGLYINKFSWNTVANLLFLEAPAGVGFSYANRSSDLLNTGDRRTAQDSLEFVIQWLERFPRYKNRELYITGESYAGHYVPQLAKEILTYNAKTKHPINLKGIMVGNAVTDNYYDNLGTVTYWWSHAMISDQTYRQLMSTCDFHRQKESDECESVYSYAMDQEFGNIDQYNIYAPPCNNSDGSSSSANRRTMRLPHRPHVDFRHWSGYDPCTEKYAEIYYNRPDVQKALHANKTGIPYRWTACSEVLNRNWNDTDVSVLPIYRELIAHGIRVWVFSGDVDSVVPVTATRYALAQLKLSTKIPWYPWYVKNQVGGWTEVYEGVTFATVRGAGHEVPLFKPRAALQLFKSFLEGKPLPKS 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02439 467 ProSitePatterns Serine carboxypeptidases, histidine active site. 431 448 IPR033124 GO:0004185
Gma18g02439 467 Gene3D alpha/beta hydrolase 30 288 IPR029058 -
Gma18g02439 467 Pfam Serine carboxypeptidase 41 461 IPR001563 GO:0004185|GO:0006508
Gma18g02439 467 Gene3D - 367 461 - -
Gma18g02439 467 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 25 9 466 - -
Gma18g02439 467 SUPERFAMILY alpha/beta-Hydrolases 32 465 IPR029058 -
Gma18g02439 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Gma18g02439 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Gma18g02439 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Gma18g02439 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 431 444 IPR001563 GO:0004185|GO:0006508
Gma18g02439 467 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 9 466 IPR001563 GO:0004185|GO:0006508
Gma18g02439 467 ProSitePatterns Serine carboxypeptidases, serine active site. 179 186 IPR018202 GO:0004185
Gma18g02439 467 Gene3D - 320 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02439 Gma-Chr18 58418040 58425021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02439 325 464 Calmodulin-binding Proteins AT2G22960 31.206 3.14e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02439 K16297 - gmx:100807680 968.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02439 18 58418040 58425021 Gma08g02258 08 21643260 21650171 GST