Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02437 ATGGCGTTCTTAAATAAAATTGGAAATCTGCTCAAGAATTCTGCTGTCAAGCACATCAATCAGGATTTTTCGGCGTCTACCCCTTCACTTTTCCAAGCAATTAGATCCATGTCATCTGCAAAGCTTTTCGTCGGAGGTATTTCTTACAGCACTGATGATATGAGTTTGCGAGAGTCTTTTGCTCGCTATGGAGAAGTAATTGATGTCAAGGTTATTATGGATCGTGAAACTGGCAGGTCAAGAGGTTTTGGCTTTGTAACTTTTGCAACAAGTGAGGATGCATCTTCTGCCATTCAGGGCATGGATGGCCAGGATCTTCATGGTCGGAGGATACGGGTGAATTATGCTACAGAAAGGTCACGTCCAGGGTTtggtggtgatggtggatatggcagtggtggtggtggtggctacaatgggggtggaaactatggaagtggaggtggatatggcagtggtagtggctataataggggtggaaactatggaagtggcggttataatgttactagcagctatagtggtggcaatgctgaaactagttacactggtggtggtaatgCTAGTAATTACCAATTCAATGAAAACTCTGGTGGAGATTTTGGCTCAGCTAGCGGTGAATTCAGCAGCAACCAAAATGACACAGCAGGTGCAGACAATGATGAATTCATTGAGCCACTTGAAGACAATGTGAGGGAGAACAATGATGGACCTACCGACTACGCTCAGAACCGCTGA 738 0.3252 MAFLNKIGNLLKNSAVKHINQDFSASTPSLFQAIRSMSSAKLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQGMDGQDLHGRRIRVNYATERSRPGFGGDGGYGSGGGGGYNGGGNYGSGGGYGSGSGYNRGGNYGSGGYNVTSSYSGGNAETSYTGGGNASNYQFNENSGGDFGSASGEFSSNQNDTAGADNDEFIEPLEDNVRENNDGPTDYAQNR 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02437 245 SMART rrm1_1 41 114 IPR000504 GO:0003723
Gma18g02437 245 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3 MITOCHONDRIAL 1 245 - -
Gma18g02437 245 Gene3D - 12 139 IPR012677 -
Gma18g02437 245 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 40 118 IPR000504 GO:0003723
Gma18g02437 245 MobiDBLite consensus disorder prediction 189 218 - -
Gma18g02437 245 MobiDBLite consensus disorder prediction 189 245 - -
Gma18g02437 245 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 42 112 IPR000504 GO:0003723
Gma18g02437 245 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 1 245 - -
Gma18g02437 245 SUPERFAMILY RNA-binding domain, RBD 25 148 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02437 Gma-Chr18 58401055 58404099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02437 42 119 Eukaryotic Initiation Factors Gene Family AT1G49760 38.462 2.32e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02437 K12741 - gmx:100807155 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02437 18 58401055 58404099 Gma08g02256 08 21628288 21630841 GST