Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02426 ATGGTCATGGCTAGGTCTCACTGTTTGTTTCCTTTGGCCTTTTTAATGGTTCTCTTTGTACCAGCCTTGGCACATGGTCGAAGAAGGGGATGGCATCTAGCCCATGCAACTTTCTATGGTGACATGCAAGGTGGAGACACCATGCAGGGAGCTTGTGGTTATGGTGATCTCTACCAGCAAGGATATGGGCTTGAAACCACAGCCCTAAGCACAGCTCTATTCAACAATGGCCAGACATGTGGTGCATGTTTTGAGATTATGTGTGTGAACTCCCAATGGTGCATTCCCAACTCAGGCCCAATCAAAGTGACCGCAACAAATTTCTGCCCCCCCAATTACAACCCCCCTAATTTCGACCATTGGTGCAACCCTCCACAAGAGCACTTCGACTTGTCCATGAAAATGTTCACCAAAATTGCCATATACAAAGCAGGGATCATCCCAGTCATGTATCGCCGTGTCCCATGCAACAAAAGTGGGGGTGTCAAGTTTGAGATGAAAGGGAACCCTTATTGGTTGTTGGTTTTGTTGTACAATGTTGGCAATGCTGGTGATGTTACTCAAGTCAGCATCAAAGGGTCTTCAAACACTGGCTGGCAATCTATGTCACGTGTTTGGGGACAAAATTGGGTTACTGGGTCTAATTTGGTAGGACAAGCCTTGTCGTTTCAAGTCACTACTAGTGATGGCAAAATGTTGGAGTTTGATAATGTTGCCCCTTCCAATTGGCAATTTGGACAGAGCTACGAGACCTACCAAAATTTTTAG 768 0.4583 MVMARSHCLFPLAFLMVLFVPALAHGRRRGWHLAHATFYGDMQGGDTMQGACGYGDLYQQGYGLETTALSTALFNNGQTCGACFEIMCVNSQWCIPNSGPIKVTATNFCPPNYNPPNFDHWCNPPQEHFDLSMKMFTKIAIYKAGIIPVMYRRVPCNKSGGVKFEMKGNPYWLLVLLYNVGNAGDVTQVSIKGSSNTGWQSMSRVWGQNWVTGSNLVGQALSFQVTTSDGKMLEFDNVAPSNWQFGQSYETYQNF 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02426 255 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 49 161 IPR007112 -
Gma18g02426 255 PRINTS Expansin signature 119 136 IPR002963 GO:0009664
Gma18g02426 255 PRINTS Expansin signature 160 172 IPR002963 GO:0009664
Gma18g02426 255 PRINTS Expansin signature 136 149 IPR002963 GO:0009664
Gma18g02426 255 PRINTS Expansin signature 172 193 IPR002963 GO:0009664
Gma18g02426 255 PRINTS Expansin signature 208 229 IPR002963 GO:0009664
Gma18g02426 255 PRINTS Expansin signature 61 75 IPR002963 GO:0009664
Gma18g02426 255 PRINTS Expansin signature 87 98 IPR002963 GO:0009664
Gma18g02426 255 PRINTS Expansin signature 237 253 IPR002963 GO:0009664
Gma18g02426 255 PRINTS Expansin signature 101 111 IPR002963 GO:0009664
Gma18g02426 255 PANTHER EXPANSIN 22 251 - -
Gma18g02426 255 Pfam Lytic transglycolase 66 151 IPR009009 -
Gma18g02426 255 PANTHER EXPANSIN-A15 22 251 IPR002963 GO:0009664
Gma18g02426 255 SMART dpbb_1 66 151 IPR007112 -
Gma18g02426 255 PRINTS Expansin/Lol pI family signature 70 88 IPR007118 GO:0005576
Gma18g02426 255 PRINTS Expansin/Lol pI family signature 237 251 IPR007118 GO:0005576
Gma18g02426 255 PRINTS Expansin/Lol pI family signature 48 66 IPR007118 GO:0005576
Gma18g02426 255 PRINTS Expansin/Lol pI family signature 30 45 IPR007118 GO:0005576
Gma18g02426 255 PRINTS Expansin/Lol pI family signature 199 213 IPR007118 GO:0005576
Gma18g02426 255 PRINTS Expansin/Lol pI family signature 144 160 IPR007118 GO:0005576
Gma18g02426 255 SUPERFAMILY Barwin-like endoglucanases 15 179 IPR036908 -
Gma18g02426 255 Gene3D - 158 255 IPR036749 -
Gma18g02426 255 Gene3D - 21 157 IPR036908 -
Gma18g02426 255 Pfam Expansin C-terminal domain 162 240 IPR007117 -
Gma18g02426 255 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 171 251 IPR007117 -
Gma18g02426 255 SUPERFAMILY PHL pollen allergen 158 250 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02426 Gma-Chr18 58330316 58331933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02426 25 255 Expansin Gene Family AT5G39280 62.069 3.90e-106 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02426 - - gmx:100799337 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02426 18 58330316 58331933 Gma08g02231 08 21267266 21268868 GST