Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02412 ATGCACAACACCTTCTCCTCTCTCCTTCGTTGGATTAGCAAAAAGTTGCGACGAAGGAATTCAATTAGCAATGGTGACAGTGGCAGCGACAGCTTCCAGAACGGTGCTGCCACAGTTGTGGATGACAATCCATTTAGCAGCGGGGTGGAGTGTTACGCCTGCACGCAAGTAGGTGTGCCGGTGTTTCACTCCACCAGCTGCGACAGTGCCTTCCACCAGTTGCAGTGGGAGGCTTCGGCTGGGTCGTCTCTGGTTCCCATCCAGAGCCGACCCAACAAGGTCCTCGGCTTTCGGACCGTGTCCGGATCAAGTCGGGGGCCGTTCGGGCGGGTTCTGGATCCGAGAAGCAAGCGCGTGCAGAGGTGGAACCGCGCGCTGCTCCTGGCGCGTGGGGTGGCGCTGGCGATAGACCCGCTGTTCTTCTACTCGCTGTCGATAGGAAGGGAGGGGTCGCCGTGCTTGTACATGGACGGAGGGCTGGCGGCGATGGTGACGGTGGCGCGCACGTGCGTGGACGCCGTGCACCTCTTGCACGTGTGGCTGCAGTTCAGGCTGGCGTACGTATCGCGGGAGTCGCTGGTGGTGGGGTGCGGGAAACTCGTGTGGGACGCGCGTGAGATCGCGTCGCATTACCTGCGATCGTTGAAGGGATTCTGGTTCGACGCATTCGTGATCCTCCCAGTCCCCCAGGTTGTGTTTTGGTTGTTAGTGCCAAAATTGCTAAGAGAAGAGAAAATTAAAATCATTATGACAATAATGCTATTGATTTTTTTGTTCCAATTTCTCCCTAAGGTTTACCATAGCATCTGCATGATGAGAAGAATGCAAAAAGTCACAGGCTACATCTTCGGCACCATTTGGTGGGGTTTTGGTCTCAATCTCATAGCTTATTTTATTGCTTCTCATGTTGCTGGAGGGTGCTGGTATGTCCTTGCAATTCAACGTGTTGCGTCGTGCCTCCGGCAGCAGTGTGAGAGAACTAATGGATGCAATCTCTCTGTGTCATGCTCAGAGGAGATATGCTACCAGTCTTTGTTACCAGCTAGCGCGATAGGAGATTCATGTGGTGGAAACTCAACAGTGGTAAGAAAGCCTCTGTGCTTAGATGTTGAAGGACCTTTCAAATATGGGATCTACCAATGGGCACTTCCTGTCATATCCAGCAACTCTTTGGCTGTAAAGATTCTTTATCCCATTTTTTGGGGTTTGATGACCCTCAGCACTTTCGGAAATGATCTTGAACCCACAAGCCACTGGCTAGAAGTGATTTTCAGTATATGCATAGTACTCAGTGGACTATTGCTTTTCACATTATTGATTGGTAACATTCAGGTATTCTTACATGCAGTCATGGCAAAGAAGAGAAAGATGCAGCTGAGATGTCGTGACATGGAATGGTGGATGAGGAGGAGGCAGTTGCCATCGCGATTAAGACAGAGAGTTCGCCATTTTGAACGTCAGAGATGGGCAGCAATGGGAGGAGAAGATGAGATGGAAATGATCAAAGACTTGCCAGAGGGGCTGAGGAGGGACATCAAGCGCCATCTTTGCCTCGATCTCATTAGAAAGGTTCCTCTATTCCACAACTTGGATGATCTTATTCTTGACAACATCTGTGACAGGGTGAAACCCCTAGTCTTCTCTAAAGATGAAAAGATAATCAGAGAAGGTGATCCTGTACCAAGGATGGTGTTCATCGTCCGAGGGCGCATAAAACGCAACCAAAGCCTTAGCAAAGGCATGGTAGCCTCAAGCATCCTTGAGCCAGGAGGGTTTTTGGGTGACGAGCTGCTTTCATGGTGCCTTCGCAGGCCGTTTATCGATAGACTTCCGGCCTCCTCGGCTACATTTGTGTGTCTTGAATCATCAGAAGCCTTTGGCCTTGATGCCAATCACTTGAGGTACATCACTGATCACTTCCGGTACAAATTTGCGAACGAGAGGCTGAAGAGAACAGCAAGATATTATTCATCCAATTGGAGAACCTGGGCTGCTGTCAACATTCAATTTGCTTGGAGACGTTACAGGCAGAGGACTAAAGGTCCAGTGACCCCTGTAAGGGACACTAATGGAGGCACTGAACGCAGGCTCTTGCAATATGCTGCAATGTTCATGTCAATAAGGCCACATGACCACCTTGAATGA 2145 0.5012 MHNTFSSLLRWISKKLRRRNSISNGDSGSDSFQNGAATVVDDNPFSSGVECYACTQVGVPVFHSTSCDSAFHQLQWEASAGSSLVPIQSRPNKVLGFRTVSGSSRGPFGRVLDPRSKRVQRWNRALLLARGVALAIDPLFFYSLSIGREGSPCLYMDGGLAAMVTVARTCVDAVHLLHVWLQFRLAYVSRESLVVGCGKLVWDAREIASHYLRSLKGFWFDAFVILPVPQVVFWLLVPKLLREEKIKIIMTIMLLIFLFQFLPKVYHSICMMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLRQQCERTNGCNLSVSCSEEICYQSLLPASAIGDSCGGNSTVVRKPLCLDVEGPFKYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSHWLEVIFSICIVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSRLRQRVRHFERQRWAAMGGEDEMEMIKDLPEGLRRDIKRHLCLDLIRKVPLFHNLDDLILDNICDRVKPLVFSKDEKIIREGDPVPRMVFIVRGRIKRNQSLSKGMVASSILEPGGFLGDELLSWCLRRPFIDRLPASSATFVCLESSEAFGLDANHLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRQRTKGPVTPVRDTNGGTERRLLQYAAMFMSIRPHDHLE 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02412 714 SUPERFAMILY cAMP-binding domain-like 453 640 IPR018490 -
Gma18g02412 714 CDD CAP_ED 526 636 IPR000595 -
Gma18g02412 714 Gene3D - 153 449 - -
Gma18g02412 714 Gene3D Jelly Rolls 524 642 IPR014710 -
Gma18g02412 714 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2-LIKE 53 714 - -
Gma18g02412 714 SMART cnmp_10 526 652 IPR000595 -
Gma18g02412 714 Pfam Ion transport protein 122 444 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gma18g02412 714 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 53 714 - -
Gma18g02412 714 Gene3D Helix hairpin bin 452 517 - -
Gma18g02412 714 ProSiteProfiles cAMP/cGMP binding motif profile. 526 636 IPR000595 -
Gma18g02412 714 SUPERFAMILY Voltage-gated potassium channels 113 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02412 Gma-Chr18 58217968 58223720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02412 9 714 Ion Channels AT5G15410 75.900 0.0 1053
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02412 K05391 - gmx:100798823 1400.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02412 18 58217968 58223720 Gma08g02215 08 21055625 21061268 GST