Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma18g02408 | ATGTACACTCCCAACGCCGATTCCGGCACGGCGCCGCATCCGCGCCCCACCATCACGCTCCCTCCGCGTCCCTCCGCCGAGGCCTTCTTCTCTGCCGCCGGCGGCGCCAGCCCCGGCCCCATGACCCTCGTCTCCAGCTTCTTCGGCTCCGATGCCGCTGCCGACTGCCGCTCCTTCTCGCAGCTCCTCGCCGGCGCTATGGCCTCCCCAATGGCCTTCTCCGCCGCCGCAGCATCCGCCGCCGACAACTCCGGCAAGGACGACGATGGGCCCCACAAGGGGTTCAAGCAGAGCAGACCCATGAATTTGGTCATTGCTCGTTCCCCTGTCTTCACTGTCCCACCTGGGTTGAGCCCTTCTGGGTTTCTTAACTCCCCTGGCTTCTTTTCCCCTCAGAGCCCCTTTGGGATGTCCCACCAACAGGCTTTAGCACAGGTTACAGCTCAAGCTGTCCTAGCTCAATCTCATATGCATATGCAAGCTGATTACCAGATGCCTTCAGTAACAGCTCCCACTGAACCACCTGTACAGCAGCTGTCTTTTGCTCTAAATGAAGCTTCAGAGCAGCAAGTGGTATCATGTGTATCAGAACCTAGAAATGCTCAACTTGAAGCACCGGAACTCTCACAGGCTGATAAGAAATATCAACCATCTTCCCAGGCCATTGACAAACCTGCAGATGATGGCTACAACTGGCGTAAGTATGGGCAGAAGCAGGTTAAGGGTAGTGAGTATCCACGAAGCTATTACAAGTGCACACATCTGAATTGCGTCGTGAAGAAAAAAGTTGAGCGTGCTCCTGATGGTCACATAACTGAAATTATCTATAAAGGCCAGCATAATCATGAAAAGCCTCAGGCAAATAGGCGTGCCAAAGATAATAGTGATTCAAATGGAAATGTAACTGTTCAGCCCAAATCTGAGTCAAACTCACAAGGTTGGGTTGGACAATTAAACAAGTTAAGTGAAAACATTCCTAATTCTTCAGTTCCTGAAAGTGACCAGACCTCCAATCAAGGGGCTCCTAGGCAACTTCTACCTGGGTCAAATGAGAGTGAGGAAGTGGGTATTGTAGATAATAGGGAAGAGGCAGATGATGGCGAGCCAAACCCTAAGAGAAGGAATACTGATGTTGGAGTTTCTGAAGTACCTCTGTCTCAGAAGACTGTCACAGAACCCAAAATCATTGTGCAAACAAGAAGTGAAGTTGATCTTTTGGATGATGGCTACAGGTGGCGAAAGTATGGCCAGAAAGTGGTGAAGGGAAACCCTCATCCAAGGAGTTATTACAAATGCACTAGTGCTGGATGCAACGTGCGTAAGCATGTTGAGAGAGCTTCGACGGACCCCAAAGCTGTCATAACCACGTATGAGGGTAAACATAATCATGATGTACCTGCTGCTAGAAACAGCAGCCACAACACAGCTAGTAGCAATTCAATGCCATTAAAACCGCATAATGTCGTGCCAGAGAAGCATCCTTTGCTTAAAGATAAGGATTTTGGAGGTAATGACCAAAGACCTGTACATTTGCGCTTAAAAGAAGAGCAAATTATAGTATAA | 1563 | 0.4946 | MYTPNADSGTAPHPRPTITLPPRPSAEAFFSAAGGASPGPMTLVSSFFGSDAAADCRSFSQLLAGAMASPMAFSAAAASAADNSGKDDDGPHKGFKQSRPMNLVIARSPVFTVPPGLSPSGFLNSPGFFSPQSPFGMSHQQALAQVTAQAVLAQSHMHMQADYQMPSVTAPTEPPVQQLSFALNEASEQQVVSCVSEPRNAQLEAPELSQADKKYQPSSQAIDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCVVKKKVERAPDGHITEIIYKGQHNHEKPQANRRAKDNSDSNGNVTVQPKSESNSQGWVGQLNKLSENIPNSSVPESDQTSNQGAPRQLLPGSNESEEVGIVDNREEADDGEPNPKRRNTDVGVSEVPLSQKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAARNSSHNTASSNSMPLKPHNVVPEKHPLLKDKDFGGNDQRPVHLRLKEEQIIV | 520 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma18g02408 | 520 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 10 | 519 | IPR044810 | GO:0003700 | |
Gma18g02408 | 520 | MobiDBLite | consensus disorder prediction | 275 | 383 | - | - | |
Gma18g02408 | 520 | PANTHER | WRKY PROTEIN | 10 | 519 | - | - | |
Gma18g02408 | 520 | ProSiteProfiles | WRKY domain profile. | 401 | 466 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gma18g02408 | 520 | MobiDBLite | consensus disorder prediction | 292 | 346 | - | - | |
Gma18g02408 | 520 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Gma18g02408 | 520 | Gene3D | WRKY domain | 212 | 286 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gma18g02408 | 520 | Gene3D | WRKY domain | 391 | 467 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gma18g02408 | 520 | SMART | WRKY_cls | 226 | 284 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gma18g02408 | 520 | SMART | WRKY_cls | 406 | 465 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gma18g02408 | 520 | ProSiteProfiles | WRKY domain profile. | 221 | 285 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gma18g02408 | 520 | SUPERFAMILY | WRKY DNA-binding domain | 398 | 466 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gma18g02408 | 520 | MobiDBLite | consensus disorder prediction | 205 | 232 | - | - | |
Gma18g02408 | 520 | MobiDBLite | consensus disorder prediction | 468 | 484 | - | - | |
Gma18g02408 | 520 | MobiDBLite | consensus disorder prediction | 275 | 291 | - | - | |
Gma18g02408 | 520 | Pfam | WRKY DNA -binding domain | 407 | 463 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gma18g02408 | 520 | Pfam | WRKY DNA -binding domain | 227 | 283 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gma18g02408 | 520 | MobiDBLite | consensus disorder prediction | 462 | 485 | - | - | |
Gma18g02408 | 520 | SUPERFAMILY | WRKY DNA-binding domain | 225 | 285 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma18g02408 | Gma-Chr18 | 58185741 | 58192206 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma18g02408 | 15 | 518 | WRKY Transcription Factor Family | AT2G03340 | 52.741 | 1.18e-148 | 434 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Gma18g02408 | WRKY | 1e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma18g02408 | - | - | gmx:100796679 | 1008.05 |