Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02394 ATGGAAGGACCATCAGGTGTGAGGAAAGGCGCATGGACTAAATGTGAAGACGACCTTCTCAGAGCTTGCGTGCAACTTTATGGAGAAGGAAAATGGCACCTTGTTCCCCAAAGAGCAGGGTTGAACAGATGCCGCAAGAGTCGTAGATTGAGATGGCTGAACTATCTAAAACCAAATATTAAGAGGGGAGATTTGAGTGAAGATGAGGTTGACATGATGATCAGAATGCATAAGCTTTTGGGAAACAGATGGTCCCTGATTGCAGGTAGACTTCCAAGAAGAACTTCAAATGATGTGAAGAATTACTGGAACACCTACATGCGCCGTAAAGTATACTCTCACAAGAAAGACAACAACGTAGAGAAGCAAGCTGAGGCCAAATCAACAGTGAAACATCACGAAGTGATAAAGCCTGTTCCTCGAACTCTATCAAAAACATCCCCATGGTTGCAAGGGAAATTTTTTAATAGTTCCAAAGTTGGTGCTAGTGGAGAAGGTGCAACTTCTATATCAGGGTCTGGGAATTGGTGGGAAACTTTGTTAGATGACAAGGAAGACAATGAAGGTAACATTAATAACACGTGCTTCTTTGGTGGGGTGGAGAGCTTGACCTTTGGGATGAGGAGCTTAATCCAATTGCTTGTGACTTTCTTGCTGAAGGTTGACATCAAGTTCTAA 678 0.4292 MEGPSGVRKGAWTKCEDDLLRACVQLYGEGKWHLVPQRAGLNRCRKSRRLRWLNYLKPNIKRGDLSEDEVDMMIRMHKLLGNRWSLIAGRLPRRTSNDVKNYWNTYMRRKVYSHKKDNNVEKQAEAKSTVKHHEVIKPVPRTLSKTSPWLQGKFFNSSKVGASGEGATSISGSGNWWETLLDDKEDNEGNINNTCFFGGVESLTFGMRSLIQLLVTFLLKVDIKF 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02394 225 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 56 IPR017930 -
Gma18g02394 225 PANTHER TRANSCRIPTION FACTOR MYB113-RELATED 6 150 - -
Gma18g02394 225 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 150 - -
Gma18g02394 225 SUPERFAMILY Homeodomain-like 6 103 IPR009057 -
Gma18g02394 225 Gene3D - 64 137 - -
Gma18g02394 225 Gene3D - 9 61 - -
Gma18g02394 225 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
Gma18g02394 225 CDD SANT 11 56 IPR001005 -
Gma18g02394 225 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
Gma18g02394 225 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Gma18g02394 225 Pfam Myb-like DNA-binding domain 64 106 IPR001005 -
Gma18g02394 225 SMART sant 61 109 IPR001005 -
Gma18g02394 225 SMART sant 8 58 IPR001005 -
Gma18g02394 225 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Gma18g02394 225 CDD SANT 66 107 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02394 Gma-Chr18 58072789 58074341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02394 2 144 MYB Transcription Factor Family AT1G66370 60.959 5.83e-57 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma18g02394 Myb_DNA-binding 1.4e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02394 - K16166 gmx:100778957 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02394 18 58072789 58074341 Gma09g02161 09 47046444 47048451 GST