Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02392 ATGGGAAGATCACCATGCTGTGACAAGGTGGGTTTGAAGAAGGGACCATGGACGCCAGAGGAAGATCAGAAGCTCTTGGCTTATATTGAAGAACATGGCCATGGAAGCTGGCGTGCTTTGCCAGCAAAAGCTGGACTTCAGAGGTGTGGCAAAAGCTGCAGATTGAGATGGACTAATTATCTAAGGCCTGATATTAAGAGGGGGAAATTCAGTATGCAAGAAGAACAAACCATCATTCAACTTCATGCTCTCTTAGGGAACAGGTGGTCTGCAATAGCCACACATTTACCAAAGAGGACAGATAACGAGATCAAGAACTACTGGAACACTCATCTTAAGAAAAGGTTAGACAAAATGGGCATTGACCCTGTGACCCACAAGCCCAAGAACGATGCCCTTGTCTCCACCGAAGGCCCTTCCAAGAGTGCTGCTAACCTCAGCCACATGGCTCAGTGGGAGAGTGCCAGGCTCGAAGCAGAAGCAAGACTGGTCAGAGAATCAAAACTACGTAGTTCTTCACACTCATCATCATCATTGCACCACACCCTAATTGGTACCTCTGCAGTATCATCATCATCTTCTTCAGCTCCAATGATACCCCCATCATCACTTTCTCTTGATCATGCATGGAACAATGGTAGTAGCATTAGTACTACTGTTAATGCAACTAGGGTTAGTGACCTTGAGTCCCCAACATCTACCTTGTCTGAGAATAATGCACCACCAATTAATATTACTAGTGTTATTGAGTTTGTGGGTTCTTCAGAGAGAGGGACGGTGAAGGAAGAGGGAGAGCAAGAGTGGAACAAATTAGGTTATCATGAAAGCTTCACCCATTTGGGAGAATACAAAGATGGCAAGGAGAATTCAATGCCTTTCACGTCTAGTCTGCATGAGTTGACAATGACCATGGCAACCACGTGGGGTTCTAGCACTAGTGGtgcacatgcacatgcacatgcacatgTTGCTGAGGAGGGTTGTTTCACCAATCTTTTGCTGAATGCTAACTCCGGTGCCCGGAGTTTGTCGCCACAGGACGGTGGAGAGTCTAATAATTGTCACGATAATGCTCGTAACAGTGGCAGTGGTAGTAGCAATGCTGACTTATATGAAGAAAACAAGAATTATTGGAACAACATTCTTAATTTGATGAATTATTCTTCCCCTTCGGATTCACCCATGTTTTGA 1191 0.4391 MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYLRPDIKRGKFSMQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLDKMGIDPVTHKPKNDALVSTEGPSKSAANLSHMAQWESARLEAEARLVRESKLRSSSHSSSSLHHTLIGTSAVSSSSSSAPMIPPSSLSLDHAWNNGSSISTTVNATRVSDLESPTSTLSENNAPPINITSVIEFVGSSERGTVKEEGEQEWNKLGYHESFTHLGEYKDGKENSMPFTSSLHELTMTMATTWGSSTSGAHAHAHAHVAEEGCFTNLLLNANSGARSLSPQDGGESNNCHDNARNSGSGSSNADLYEENKNYWNNILNLMNYSSPSDSPMF 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02392 396 MobiDBLite consensus disorder prediction 121 140 - -
Gma18g02392 396 CDD SANT 69 112 IPR001005 -
Gma18g02392 396 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Gma18g02392 396 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 1 391 - -
Gma18g02392 396 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Gma18g02392 396 CDD SANT 16 61 IPR001005 -
Gma18g02392 396 Gene3D - 13 66 - -
Gma18g02392 396 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Gma18g02392 396 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Gma18g02392 396 SMART sant 13 63 IPR001005 -
Gma18g02392 396 SMART sant 66 114 IPR001005 -
Gma18g02392 396 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 391 - -
Gma18g02392 396 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Gma18g02392 396 MobiDBLite consensus disorder prediction 340 368 - -
Gma18g02392 396 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Gma18g02392 396 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Gma18g02392 396 Gene3D - 69 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02392 Gma-Chr18 58048672 58051195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02392 1 245 MYB Transcription Factor Family AT3G01140 69.478 5.78e-112 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma18g02392 Myb_DNA-binding 1.4e-15 CL0123