Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02368 ATGAGGAGAGTTATCTTGCGAAGAGATGGAAGGACTAGATATTCGAACAACTCGTTGGTGACGATTGTGAGACATGTGAGATATATCGCGAGTGCTAGGAATCTTTCATATAGAATTGGAGGAATTGTTGTGGATGGCTACAGGGAGTTTGTGGTCAGTGGCGCCGAAGGGACTGGCGGAGCTATGACTTGTGCTACATGTGGCTGCCATAGAAATTTCCATAGGAAGGAAGAGCAAACTCAAATGGTTTGTGCCTGCTCTTCTCACCCAACTACCCGTTCCGGTGAACTTTGA 294 0.466 MRRVILRRDGRTRYSNNSLVTIVRHVRYIASARNLSYRIGGIVVDGYREFVVSGAEGTGGAMTCATCGCHRNFHRKEEQTQMVCACSSHPTTRSGEL 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02368 97 Pfam ZF-HD protein dimerisation region 26 78 IPR006456 -
Gma18g02368 97 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 21 87 - -
Gma18g02368 97 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 28 77 IPR006456 -
Gma18g02368 97 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 31 77 IPR006456 -
Gma18g02368 97 PANTHER MINI ZINC FINGER PROTEIN 2 21 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02368 Gma-Chr18 57788952 57789245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02368 2 92 Zinc finger-homeobox gene family AT3G28917 48.421 1.59e-21 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Gma18g02368 ZF-HD_dimer 1.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02368 - - dzi:111292097 95.1301