Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02353 ATGTGGAGAGTTATTTTGCACAGTGATGGAACTGTAAGGTGCTGGAATAATTCACCAGTGACGATTGTGAAGCACGTGAAATATCGTGAGTGCTGCAGGAATCTTGCATGTAGAATTGGAGGACATATTGTGGATCGCTGCAGCGAGTTCGTGGCCTATGGAGCTGAAGGGACCAGCGCAGCCATGACTTGTGCAACATGTGGCTGCCATAGAAACTTTCACAGAAAGGAAGAGCAAATTCAATTGGTTTGTACCTGTTCTTCTCATCCTACTACGGGTACCGGTGGTGGAGCTTGA 297 0.4714 MWRVILHSDGTVRCWNNSPVTIVKHVKYRECCRNLACRIGGHIVDRCSEFVAYGAEGTSAAMTCATCGCHRNFHRKEEQIQLVCTCSSHPTTGTGGGA 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02353 98 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 28 77 IPR006456 -
Gma18g02353 98 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 21 87 - -
Gma18g02353 98 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 27 77 IPR006456 -
Gma18g02353 98 PANTHER MINI ZINC FINGER PROTEIN 2 21 87 - -
Gma18g02353 98 Pfam ZF-HD protein dimerisation region 26 78 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02353 Gma-Chr18 57627981 57628277 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02353 23 93 Zinc finger-homeobox gene family AT3G28917 55.556 1.47e-22 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Gma18g02353 ZF-HD_dimer 1.7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02353 - - tcc:18601512 102.834