Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02352 ATGCCGGCACAATTCTTGGTGACAAATGTGAAATATCAGGAGTGCCGAAGGAATCATGCGTGTAGGGATGGAGGATATATTTTGGATGGCTGCAGGGAATTCGTAGCAAGTGGTGCGGAAGGCACTGATTCAGCTATGACTTGTGCTACATGTGGCTGCCATAGGAACTACCACAGGAGGGAAGACTTTTGTGATTGTCCTTCTCATCCTGCTGCTAATGGAGCTTGA 228 0.4781 MPAQFLVTNVKYQECRRNHACRDGGYILDGCREFVASGAEGTDSAMTCATCGCHRNYHRREDFCDCPSHPAANGA 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02352 75 PANTHER MINI ZINC FINGER PROTEIN 2 4 67 - -
Gma18g02352 75 Pfam ZF-HD protein dimerisation region 9 61 IPR006456 -
Gma18g02352 75 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 12 61 IPR006456 -
Gma18g02352 75 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 4 67 - -
Gma18g02352 75 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 11 61 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02352 Gma-Chr18 57624866 57625093 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02352 7 61 ZF-HD Transcription Factor Family AT1G74660 61.818 7.76e-23 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Gma18g02352 ZF-HD_dimer 9.1e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02352 - - pop:7482471 101.679