Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02339 ATGGTAATGATGAAAGAGAATATTATTGAAGTGAAGCTTGGAAGGAGCCAAATGTCTATGGTAGAAGGTGAGTTCCAAGGAACATGGGGTGTCAAGAGACGACGAAGAGAGGTTGCTGCAGCAGCAAGCAGCCGTGATGATAACCACCACCAGCAGTCACCACAGCAAGAAGTTGGTGAAAATTCTTCAATCAGCACAACAAAGAGAAGCTCAAGATTTCGCGGTGTTAGCAGACATAGATGGACGGGTCGGTATGAAGCTCACTTGTGGGACAAACTCTCTTGGAACATAACACAGAAGAAGAAAGGGAAGCAAGGGGCTTATGATGAAGAAGAATCTGCTGCCAGAGCATATGATTTAGCTGCACTTAAGTATTGGGGAAATTCAACTTTCACCAATTTTCCAATATCAGATTATGAGAAAGAGATAGAAATAATGCAGACTATGACCAAAGAGGAGTATTTGGCCACTTTAAGGAGAAAGAGCAGTGGCTTTTCAAGAGGTGTATCAAAGTATCGGGGTGTTGCAAGGCACCACCACAATGGTAGATGGGAAGCAAGAATAGGAAGGGTTTTTGGAAACAAATATCTCTACCTTGGCACCTACAGCACCCAAGAAGAAGCTGCGCATGCTTATGACATAGCAGCCATTGAGTACAGAGGAATTCATGCTGTAACAAACTTTGATTTGAGCACTTACATAAAATGGTTAAAGCCTTCAGGAGGAGGCACCCCAGAAGCAAATCTTGAATCACATGCAGTACTAGAGCATCAAAAGTTGGCATCCCCATCTAACTATGCTCTAACAGAAGAGTCTAAGTCTTTGGTCCTTCACAACAGTTTTATCAGTCCAGATTCTCTGGATTCACCTGTAAAGCATGAAAGTTTTGGAAACAAAACCTACCAATTCTCAAGCAATAAGTCATCTTCTCCCACTGCACTTGGTCTCCTTCTGCGCTCTTCGCTATTTAGAGAATTGGTTGAAAAGAATTCAAATGTTTCTGGAGAAGAAGCTGATGGGGAAGTCACTAAGGATCAACAGCCACAAATAGCTAGCGATGATGATCTGGATGGAATCTTCTTCAATAGCTTTGGTGATATTCCATTTGTGTGTGATTCCACCAGATACAACTTGGAATTTCAGGAAAGAGAGCTGCACTCAATATTTTGA 1170 0.4214 MVMMKENIIEVKLGRSQMSMVEGEFQGTWGVKRRRREVAAAASSRDDNHHQQSPQQEVGENSSISTTKRSSRFRGVSRHRWTGRYEAHLWDKLSWNITQKKKGKQGAYDEEESAARAYDLAALKYWGNSTFTNFPISDYEKEIEIMQTMTKEEYLATLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAAHAYDIAAIEYRGIHAVTNFDLSTYIKWLKPSGGGTPEANLESHAVLEHQKLASPSNYALTEESKSLVLHNSFISPDSLDSPVKHESFGNKTYQFSSNKSSSPTALGLLLRSSLFRELVEKNSNVSGEEADGEVTKDQQPQIASDDDLDGIFFNSFGDIPFVCDSTRYNLEFQERELHSIF 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02339 389 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Gma18g02339 389 PRINTS Ethylene responsive element binding protein signature 211 231 IPR001471 GO:0003700|GO:0006355
Gma18g02339 389 SMART rav1_2 171 235 IPR001471 GO:0003700|GO:0006355
Gma18g02339 389 SMART rav1_2 72 141 IPR001471 GO:0003700|GO:0006355
Gma18g02339 389 CDD AP2 71 137 IPR001471 GO:0003700|GO:0006355
Gma18g02339 389 SUPERFAMILY DNA-binding domain 170 231 IPR016177 GO:0003677
Gma18g02339 389 MobiDBLite consensus disorder prediction 36 75 - -
Gma18g02339 389 CDD AP2 170 231 IPR001471 GO:0003700|GO:0006355
Gma18g02339 389 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 9 372 - -
Gma18g02339 389 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 9 372 - -
Gma18g02339 389 SUPERFAMILY DNA-binding domain 71 137 IPR016177 GO:0003677
Gma18g02339 389 Pfam AP2 domain 170 221 IPR001471 GO:0003700|GO:0006355
Gma18g02339 389 Pfam AP2 domain 71 127 IPR001471 GO:0003700|GO:0006355
Gma18g02339 389 ProSiteProfiles AP2/ERF domain profile. 171 229 IPR001471 GO:0003700|GO:0006355
Gma18g02339 389 ProSiteProfiles AP2/ERF domain profile. 72 135 IPR001471 GO:0003700|GO:0006355
Gma18g02339 389 Gene3D AP2/ERF domain 170 231 IPR036955 GO:0003700|GO:0006355
Gma18g02339 389 Gene3D AP2/ERF domain 71 137 IPR036955 GO:0003700|GO:0006355
Gma18g02339 389 MobiDBLite consensus disorder prediction 45 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02339 Gma-Chr18 57495470 57497482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02339 49 272 AP2-EREBP Transcription Factor Family AT5G57390 56.303 1.86e-81 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Gma18g02339 AP2 1.4e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02339 - - gmx:100779867 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02339 18 57495470 57497482 Gma09g02204 09 47548631 47550635 GST