Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02335 ATGCAGTCTTCCACTGCCTCTCTCTTCCACCACCTACAGCCCCTTTGGACTGATTTTCATAACTGGGTTTGTGTTTGTGTTTGTTTTTTTTTAACTGAATTATCTATGTACTTAGTTTTGTGGAAGATGGGGTTTAGGAATAATGCAATTCAGGCTGGGAGTTTGGATGTGGGAAAGTCAAAGGGAAGGATGCAAAAGGATGGTGCTGAGAAGGAAATTGGGTGCTGTGTTAAATTCTGTTTCATTGGGGGCTGTATACCTTCAAGATCAAAGGTGGATAACTCCATAAGTGGCACTAGTGCTAACAGTGTGGAAAAAACATCTGCATCTGAGAAAAGCAAGAAGGAAACAAATGCTCCTCCAGGGTCCTCTACAACAACCAGTAATGCAGAAAGTGTCCCTTCGACTCCAAAATTCAGTGAGGAGTTGAAGGTTTCTTCTCGTTTGAGAAAATTTACATTCAATGAGCTTAAGTTGGCCACTAGGAATTTCAGACCGGAGAGTCTTCTTGGCGAGGGAGGGTTTGGTTGTGTGTTCAAGGGTTGGATTGAGGAAAATGGAACTGCACCTGTGAAACCTGGCACTGGGCTTACTGTTGCAGTCAAGACCCTTAACCATGATGGACTGCAGGGTCACAAAGAGTGGCTTGCAGAGTTAGACATTCTCGGTGACCTTGTCCATCCAAATCTGGTCAAATTGGTTGGTTTCTGTATTGAAGATGACCAAAGATTATTGGTTTATGAATGTATGCCCCGTGGAAGTTTGGAGAACCACCTCTTCAGAAAAGGGTCGTTGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCACTTGGTGCTGCAAAAGGTCTTGCTTTTCTCCATGAAGAAGCTCAAAGACCTGTAATCTATCGTGATTTTAAGACGTCTAATATTCTATTAGATGCGGAATACAATGCCAAGCTCTCTGATTTTGGACTCGCCAAAGATGGTCCTGAAGGGGAAAAGACACACATATCTACCAGAGTCATGGGAACATATGGTTATGCTGCTCCTGAGTATGTCATGACTGGACATTTGACATCAAAAAGTGATGTCTATAGTTTTGGAGTAGTGCTACTTGAAATGCTCACTGGCCGGCGATCTATCGATAAGAATAGACCAAACGGGGAACACAATCTTGTGGAGTGGGCAAGGCCTGTACTTGGGGACCGGAGGATGTTATTACGGATAATTGATCCTCGCCTTGAAGGTCACTTCTCTGTTAAAGGGTCACAGAAGGCTGCGCAGCTTGCTGCTCAATGCCTTAACCGTGATCCAAAATCCAGACCTATGATGAGTGAAGTTGTTCAAGCTCTGAAGCCTTTGCAAAACCTTAAAGATATGGCTATCTCATCTTACCACTTCCAGGTTGCGCGAGTAGATCGTACTATGTCCATGCCTAAAAATGGTATGCAAGCACAGTTAGCATCTTTATCAAGGAAGGGTCAACCAGTGAGGATCTTGTCAAGTCCAAAAGGCTTGAGCAAGAGAAATGAGATGGCAAATGCTGCAGAAGAGGAGCTTGAAAAGAACAAGAGTGCCAAGAATACCAACGCCTTTGACATTACTATTGTCAAACATCATGAGATGGAGTCCAAGGTTCTTGTTGATAAAGGGGTCTCCGATGTCAAGAATGCCACTAGTTATGCCAATGACAACTCTACGATTGTTGTTGTGATGGCGGGAATGACAATAGCAAGACGACAAAGGCAAAGGCTAAGCTCCTCTCTTTGTGTGGCTCCGCCGTCACCTCCCACACCACCACAGAAGCTTGAGTTTCTTGAAGGAATTACATTGAGCTGTAGTTTTAACTTTAAGGGCTCCAAAGTAGAATTAAAATCTAAATTTTGA 1869 0.4355 MQSSTASLFHHLQPLWTDFHNWVCVCVCFFLTELSMYLVLWKMGFRNNAIQAGSLDVGKSKGRMQKDGAEKEIGCCVKFCFIGGCIPSRSKVDNSISGTSANSVEKTSASEKSKKETNAPPGSSTTTSNAESVPSTPKFSEELKVSSRLRKFTFNELKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAELDILGDLVHPNLVKLVGFCIEDDQRLLVYECMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAQRPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGEKTHISTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSIDKNRPNGEHNLVEWARPVLGDRRMLLRIIDPRLEGHFSVKGSQKAAQLAAQCLNRDPKSRPMMSEVVQALKPLQNLKDMAISSYHFQVARVDRTMSMPKNGMQAQLASLSRKGQPVRILSSPKGLSKRNEMANAAEEELEKNKSAKNTNAFDITIVKHHEMESKVLVDKGVSDVKNATSYANDNSTIVVVMAGMTIARRQRQRLSSSLCVAPPSPPTPPQKLEFLEGITLSCSFNFKGSKVELKSKF 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02335 622 Gene3D Transferase(Phosphotransferase) domain 1 250 467 - -
Gma18g02335 622 MobiDBLite consensus disorder prediction 114 139 - -
Gma18g02335 622 CDD STKc_IRAK 170 448 - -
Gma18g02335 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 294 306 IPR008271 GO:0004672|GO:0006468
Gma18g02335 622 MobiDBLite consensus disorder prediction 494 518 - -
Gma18g02335 622 Gene3D Phosphorylase Kinase; domain 1 148 249 - -
Gma18g02335 622 PANTHER OS01G0588500 PROTEIN-RELATED 99 500 - -
Gma18g02335 622 Pfam Protein kinase domain 167 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02335 622 ProSitePatterns Protein kinases ATP-binding region signature. 170 202 IPR017441 GO:0005524
Gma18g02335 622 Coils Coil 503 523 - -
Gma18g02335 622 PANTHER RECEPTOR-LIKE KINASE PLANT 99 500 - -
Gma18g02335 622 SUPERFAMILY Protein kinase-like (PK-like) 138 445 IPR011009 -
Gma18g02335 622 MobiDBLite consensus disorder prediction 94 139 - -
Gma18g02335 622 ProSiteProfiles Protein kinase domain profile. 164 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02335 Gma-Chr18 57462043 57468590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02335 122 461 Glycoside Hydrolase AT3G07070 51.705 5.75e-115 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma18g02335 Pkinase 6.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02335 - - gmx:100305393 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02335 18 57462043 57468590 Gma09g02208 09 47574458 47578243 GST
Gma19g00174 19 2110379 2115277 Gma18g02335 18 57462043 57468590 PCT
Gma18g02335 18 57462043 57468590 Gma19g00174 19 2110379 2115277 PCT