Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02325 ATGAGAATTGGTTCTCCTTCTTCTTCTTCCTCTTCCTCCGGTTGTTCGCGTTTCTGGTCCTCGGCGCTCCGATCAAAGCGCCTTATGTCGCCGGCGGAGAAGGCCGCCCGCGAAAGCTCCGACCTCGGCCTCTCCCGCCGCCTCGGCGTCCTCGACCTCGTACTCCTCGGAATCGGCGCCTCCATCGGCGCCGGCATCTTCGTCGTCACCGGCACCGTCGCCCGCGACGCCGGACCCGGAGTAACAATAAGTTTTATACTTGCGGGAGCATCGTGCGTTATAAATGCTCTCTGTTATGCTGAACTAGCTACCCGATTTCCTGCTGTTGTTGGAGGAGCATATCTGTATGCGTACACAGCTTTTAATGAACTTACAGCATTTCTTGTTTTTGGACAATTGATGCTTGACTATCACATTGGGGCAGCTAGTATAGCGAGAAGCCTAGCCAGTTATCTAATAAATATTCTAGAACTCTTCCCTGTTTTCAAAGATAACATTCCAAAATGGATTGGGCATGGTGAAGACATTGGAGATGTGCTATCCATCAATGTCTTGGCTCCAATTCTGCTAGTTCTTCTGACTTTTATTCTCTGTCGGGGTGTTCAAGAATCGTCTGTTGTGAATTCTCTTATGACAGTGACCAAGATAATCATAGTTATCATTGTCATTTTTGCTGGAGCATTTGAGGTTGACGTTTCCAACTGGTCTCCCTTTGCTCCAAATGGTTTAAAAGCCATATTTACGGGAGCTACTGTAGTCTTCTTTGCTTATGTTGGATTTGATGCTGTTGCAAATTCTGCTGAAGAATCTAAGAGGCCTCAGCGGGATTTGCCAATAGGCATAATAGGAAGCCTCTTAATATGTATTGCATTGTACATTGGAGTTTGCCTGGTGATTACTGGAATGGTTCCATATAATCTTCTAGGAGAAGATGCTCCTTTGGCTGAAGCTTTTTCGTCTAAGGGATTAAAATTTGTTTCTATTCTGATTAGTGTTGGTGCTGTTGCTGGACTTACAACAACACTCCTTGTTGGTCTATACGTTCAGCAGTCTCGGCTATATCTTGGGCTTGGCAGGGATGGCTTACTACCCTTAGTATTTGCTAAAGTCCACTCCAAATACCACACCCCTGTTCATTCTCAGATCTGGGTTGGCTTGGTTGCCAGTGTTTTGGCTGGGCTATTTAATGTTCATGTGCTCTCTCACATTCTTTCCGTTGGTACACTGACTGGCTATTCGGTTGTCTCAGCATGTGTTGTCGTTCTTCGCTGGAAGGATAAGACAAATAGTCAAGTGTCATCTTCTGCTGAGCGGGAAGGCATAATTTGCCTCATTGCTGTTGCTCTTTGTGGATTTGCTAGTGGGCTCTTGTACCGATATGATGCTTCATTTATTTTTCTGATTCTGGCTTTAGTTATTGCAGTTGGTGCTTCAGCTGCTCTTGTTTTCCGTCAGAACACATTGATGGTTGTATGTGTCAAGTACACGAAACGGAGAGGCAATCTCAAGGTTTATGCAGATGCACCAGGGTTTTCTTGCCCAGGGGTTCCCCTTCTGCCAAATATTTGCATCTTTTTTAACATGTTCTTATTTGCCCAGCTACATCATGAAGCATGGGTGAGATTTGTGATTCTTTGTGTTGTCATGGTTGGTGTTTATGCAATATACGGTCAATATCATGCTAACCCCAGTGCAGAAGAGAATGTCTATCAAAGGGCACTAGAGGAAGAAGCTCTATGA 1740 0.4517 MRIGSPSSSSSSSGCSRFWSSALRSKRLMSPAEKAARESSDLGLSRRLGVLDLVLLGIGASIGAGIFVVTGTVARDAGPGVTISFILAGASCVINALCYAELATRFPAVVGGAYLYAYTAFNELTAFLVFGQLMLDYHIGAASIARSLASYLINILELFPVFKDNIPKWIGHGEDIGDVLSINVLAPILLVLLTFILCRGVQESSVVNSLMTVTKIIIVIIVIFAGAFEVDVSNWSPFAPNGLKAIFTGATVVFFAYVGFDAVANSAEESKRPQRDLPIGIIGSLLICIALYIGVCLVITGMVPYNLLGEDAPLAEAFSSKGLKFVSILISVGAVAGLTTTLLVGLYVQQSRLYLGLGRDGLLPLVFAKVHSKYHTPVHSQIWVGLVASVLAGLFNVHVLSHILSVGTLTGYSVVSACVVVLRWKDKTNSQVSSSAEREGIICLIAVALCGFASGLLYRYDASFIFLILALVIAVGASAALVFRQNTLMVVCVKYTKRRGNLKVYADAPGFSCPGVPLLPNICIFFNMFLFAQLHHEAWVRFVILCVVMVGVYAIYGQYHANPSAEENVYQRALEEEAL 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02325 579 Gene3D Amino acid/polyamine transporter I 44 488 - -
Gma18g02325 579 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Gma18g02325 579 Pfam Amino acid permease 48 454 IPR002293 GO:0016020|GO:0022857|GO:0055085
Gma18g02325 579 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 8 574 - -
Gma18g02325 579 PANTHER CATIONIC AMINO ACID TRANSPORTER 9, CHLOROPLASTIC 8 574 - -
Gma18g02325 579 Pfam C-terminus of AA_permease 511 560 IPR029485 -
Gma18g02325 579 PIRSF AA_transporter 440 579 - -
Gma18g02325 579 PIRSF AA_transporter 30 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02325 Gma-Chr18 57069276 57075778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02325 10 485 Organic Solute Cotransporters AT1G05940 71.310 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02325 K03294 - gmx:100776671 998.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02325 18 57069276 57075778 Gma18g02325 18 57069276 57075778 ECH
Gma18g02325 18 57069276 57075778 Gma09g02216 09 47683383 47688289 GST
Gma13g00521 13 17685023 17686911 Gma18g02325 18 57069276 57075778 PCT
Gma19g00122 19 1267920 1269695 Gma18g02325 18 57069276 57075778 PCT