Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02313 ATGGATAATTATTGTGATGCTACTACTGCTACTACTGAATCCGACATGACACTTTCGGACCTTATTCAACATTACATGCATGATGATGAAGCCAATGCTTTGAACAATAATGTGGAAGGTGCTAAAGCACAAAAAGAAGTTCCGAAATGGACGAGGTACAAAGGAGTGAGGCGTAGGGCACATGGAAAGTTTGCTGCTGAGATAACAGACCCAAACAAAAATGGTAGGGTTTGGCTTGGGACTTATGACACTGAAGAGGAAGCTGCTTTGGCCTATGACAATGCTGCTTTCAAGATCAGAGGCTCCAAATCCAAGCTCAATTTTCCTCACCTCATTCCACCCAAGCTGCCATTGGATGCTTCAATTGCAAGTAGCCAGATGAGTGACCCTCCTTCTTCATCATCCACATTTGAGGATGGTTTAGAAGGATCCAAGAAAATGAAGGGGATAGCTGGTTTGCTAAATAAATTAGCCCATGAACGAAATAGAGTTTGA 495 0.4263 MDNYCDATTATTESDMTLSDLIQHYMHDDEANALNNNVEGAKAQKEVPKWTRYKGVRRRAHGKFAAEITDPNKNGRVWLGTYDTEEEAALAYDNAAFKIRGSKSKLNFPHLIPPKLPLDASIASSQMSDPPSSSSTFEDGLEGSKKMKGIAGLLNKLAHERNRV 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02313 164 PANTHER AP2-DOMAIN DNA-BINDING PROTEIN 10 162 - -
Gma18g02313 164 PRINTS Ethylene responsive element binding protein signature 53 64 IPR001471 GO:0003700|GO:0006355
Gma18g02313 164 PRINTS Ethylene responsive element binding protein signature 75 91 IPR001471 GO:0003700|GO:0006355
Gma18g02313 164 CDD AP2 51 111 IPR001471 GO:0003700|GO:0006355
Gma18g02313 164 ProSiteProfiles AP2/ERF domain profile. 52 109 IPR001471 GO:0003700|GO:0006355
Gma18g02313 164 SUPERFAMILY DNA-binding domain 52 110 IPR016177 GO:0003677
Gma18g02313 164 PANTHER DNA-BINDING DOMAIN 10 162 IPR044808 GO:0003700|GO:0009873
Gma18g02313 164 SMART rav1_2 52 115 IPR001471 GO:0003700|GO:0006355
Gma18g02313 164 Pfam AP2 domain 51 101 IPR001471 GO:0003700|GO:0006355
Gma18g02313 164 Gene3D AP2/ERF domain 51 110 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02313 Gma-Chr18 56971481 56971975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02313 40 112 AP2-EREBP Transcription Factor Family AT2G44840 67.568 1.79e-28 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma18g02313 AP2 6.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02313 K09286 - gmx:100819961 314.694