Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02309 ATGGAGAGGGTTGCAGAGCCAAAGGTACTTCCTCGGTCCTTGCCTGTTCTAGTTGAGGTATCTAATGGACACACCGCTGCAATAAGAGAAGCTGGTCAAAGACTAAATGGGCAGGATGTTTCGAGTGTGTGTGGGATTCCAGCAAGAGAAGGGAATCAGTTTTCAAAATCACGGGATGGCCCTATGGCACGTCTTGCCTCCATCAGAGAAGTGGCTCAGTTATCGAATGCACGAATAGTTTTGGTAAGAGAGGATATGGGATTCGATACACGCTGTCAAGAGCCTCCCTCCCCTGTGCCTGTGCCTACAAGAACATGGAAAGGAAAGGGCTCTTTACCAGAAGCTGTAGAACTTGTGTCTGATATTGAGAAATTGAAGGGTAGCAATGATTCTTTTGTGGAAACTGGTCCAAGTTCATTTGCTGGTGCTAGTCATCCCCCAGAACCTGTTGATACTGATCTTATGAGAACAGTTTTTGTACCAATAGGTCAAACTAAATCTGAAGCTGGATGCTTAATGAAGAGCGTGTCCTTGAAGGGTCCTTTCTTAGAAGATCTTTCAATTCGTGTTCTTGCAAAGAAACCAAGCCTGGCTGTTGTTTCTCCTGCAGAAATCATGGCTGAGGAATCAAATGAGATGGGTAACTTATCCTCACCATTTTCAGGTGCTCGTGCATCACAGAATACTGAGAACTCTCCCCTTGCCCCAGACTCTGATGAGAAAGAATGTGTTTGGGATGCATCATTGCCTCCAAGTGGCAATGTCAGTCCTCATAGTAGTATTGATAGTACTAGTGTTGTCAGAACAATGAGCATTGTTAATAGTTGTGCAAGTACATACCGGAGTGATGCAGTTACTAGTGATGGAATGCTTAGTTTGGACAGGAATTGTGATAGCACTAAAGGAAGTGTAAGAGGGGATTCACTTGAGAGTGCAAAAACTAGTGCTAGTCGAGCAAGTGACAGCAGTGGCCTCAGTGATGACAGCAACTGGAGTAACATTACTGGCAGTGCCAATAAGCCCCACAAAGGAAATGATCCTAGGTGGAAGGCTATCCTTGCCATCCGAGCCCGGGATGGAATTTTGGGCATGAGTCATTTTAGGTTACTCAAACGGCTTGGTTGTGGTGATATTGGAAGTGTATATCTCTCAGAGCTGAGTGCAACTCGGTGCTTTTTTGCAATGAAAGTTATGGACAAGGCATCCTTAGCAAGCAGAAATAAGCTGACTAGGGCACAGACAGAAAGAGAGATATTACAGTTGCTGGATCATCCATTTCTACCTACTTTGTATACACATTTTGAGACTGACAGATTCTGCTGTTTGGTAATGGAATACTGTCCTGGGGGTGATCTACACACTTTAAGGCAACGGCAACCTGGGAAACATTTCTCAGAGTATGCTGCACGCTTTTATGCTGCAGAGGTCCTGTTGGCACTTGAATATCTTCACATGCTTGGAGTCGTGTATCGAGACCTTAAACCTGAAAATGTACTGGTCCGAGATGATGGTCACATAATGCTCTCAGATTTCGATCTTTCTCTCAGATGTGCTGTTTCACCTACCCTTATTAGAAATTTTGACAGCGACCCCTCAAAACGAGGTGGTGGTGCATTCTGTGTCCAGCCGGCATGTATCGAGCCTTCATCAGTATGCATCCAGCCTTCATGTTTTATGCCTCGCCTCTTTGCTCAGAAAAATAAGAAGTCACGAAAGCCTAAAGGCGATCCTGGCTTGCCATCCAGCACGCTTCCTGAGCTTGTTGCAGAACCAACAACAGCTCGGTCGATGTCTTTTGTTGGCACTCACGAATACCTTGCCCCTGAAATCATCAAAGGAGAAGGTCATGGAAGTGCAGTTGATTGGTGGACATTTGGAATTTTCTTGCATGAGCTATTATATGGTAAAACTCCTTTCAAAGGATCAGGAAACCGTGCAACACTGTTCAATGTAGTGGGCCAGCAGCTCAGATTTCCTGAATCGCCGGCCACAAGTTATGCCAGCCGTGATCTGATCCGGGGCTTGCTGGTGAAGGAGCCGCAGCACCGTCTCGGGGTGAAGAGAGGCGCGACTGAGATCAAACAACACCCCTTCTTTGAAGGCGTGAACTGGGCATTGATTAGGTGCAGCACACCACCCGAAGTTCCAAGACCAGTTGAATTTGATCCACCGGCAAAGTTTGAACCAGTTGATACTGTTGGGGTTGGCAACAACAACATCAACAACAACAATAGTAGTAAGAGGATGGTGGGTAATAATAATGACATGAAGTCTGGGGTTTAG 2283 0.4577 MERVAEPKVLPRSLPVLVEVSNGHTAAIREAGQRLNGQDVSSVCGIPAREGNQFSKSRDGPMARLASIREVAQLSNARIVLVREDMGFDTRCQEPPSPVPVPTRTWKGKGSLPEAVELVSDIEKLKGSNDSFVETGPSSFAGASHPPEPVDTDLMRTVFVPIGQTKSEAGCLMKSVSLKGPFLEDLSIRVLAKKPSLAVVSPAEIMAEESNEMGNLSSPFSGARASQNTENSPLAPDSDEKECVWDASLPPSGNVSPHSSIDSTSVVRTMSIVNSCASTYRSDAVTSDGMLSLDRNCDSTKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSATRCFFAMKVMDKASLASRNKLTRAQTEREILQLLDHPFLPTLYTHFETDRFCCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRNFDSDPSKRGGGAFCVQPACIEPSSVCIQPSCFMPRLFAQKNKKSRKPKGDPGLPSSTLPELVAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVEFDPPAKFEPVDTVGVGNNNINNNNSSKRMVGNNNDMKSGV 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02309 760 ProSiteProfiles Protein kinase domain profile. 367 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02309 760 MobiDBLite consensus disorder prediction 212 263 - -
Gma18g02309 760 MobiDBLite consensus disorder prediction 296 344 - -
Gma18g02309 760 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Gma18g02309 760 MobiDBLite consensus disorder prediction 296 340 - -
Gma18g02309 760 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 76 752 - -
Gma18g02309 760 MobiDBLite consensus disorder prediction 212 234 - -
Gma18g02309 760 MobiDBLite consensus disorder prediction 734 760 - -
Gma18g02309 760 SUPERFAMILY Protein kinase-like (PK-like) 349 724 IPR011009 -
Gma18g02309 760 Pfam Protein kinase domain 368 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02309 760 Pfam Protein kinase domain 596 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02309 760 Gene3D Transferase(Phosphotransferase) domain 1 451 517 - -
Gma18g02309 760 MobiDBLite consensus disorder prediction 730 760 - -
Gma18g02309 760 Gene3D Transferase(Phosphotransferase) domain 1 595 716 - -
Gma18g02309 760 MobiDBLite consensus disorder prediction 568 587 - -
Gma18g02309 760 Gene3D Phosphorylase Kinase; domain 1 365 450 - -
Gma18g02309 760 SMART serkin_6 367 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g02309 760 PANTHER FLIPPASE KINASE 1-RELATED 76 752 - -
Gma18g02309 760 CDD STKc_phototropin_like 365 723 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02309 Gma-Chr18 56903496 56907078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02309 1 751 AGC Kinase Gene Family AT2G44830 66.927 0.0 929
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gma18g02309 Pkinase 8.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02309 - - gmx:100818352 1484.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02309 18 56903496 56907078 Gma18g02309 18 56903496 56907078 ECH
Gma18g02309 18 56903496 56907078 Gma09g02225 09 47790676 47795534 GST
Gma03g01042 03 34935661 34940035 Gma18g02309 18 56903496 56907078 PCT
Gma07g01041 07 12303163 12307463 Gma18g02309 18 56903496 56907078 PCT