Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02286 ATGGCCTCCCCTTCTTCCCCCACCGACTCCAACCCACCCTCTGCCGTCCCCCTCCCTCTCCCGGCGCCTCCCGCCACCTCCTCCCGCCGCCTTCCTCCGCCCTGCTGGACCCCGGAGGAAACCGCCGCCCTCATCGACGCCTACCGCGACAAATGGTACTCCCTCGGCCGCACCAACCTGAAGGCTACCCACTGGCAAGAGGTGGCCGACGCCGTCACCGCGCAGTGCCCCAACGCCTCCCCCACGGCGAAAACCGCCGTGCAGTGCCGCCACAAGATGGAGAAGCTCCGCAAACGCTACCGCACCGAAATCCAACGCCTCCGCAACCTCCCCTTCCCCCGCCTCAACAACGCCAACACCAATTCCCCTTCCTCGTGGGTCCACTTCAAATCCATGGACTCCATGGAAAAAGGCCCCAACCACAAACCCCACTCCGACATCAACAACAACAACCTCAATTTCCACGATGACGACGACGACGACTATCTGTACGAGGAATTCAAAACCGCCCCCGGATCCAACACCAACACGAGAAGCCTCAACAAGCTCTACAAGAACAACAACGGATTCAATTCGGGTGGTTCGGGCTCCGGATCCGGGTTTCGGATTCGGATCCCGGCCGGCGTGCCACAACAACAACATACGGCGTCGTCTAATAAGATTTTCAACAGCCATCTTCCTCCCGGGATAGTGCCACGTGGCGGAGGCGTGAAGAGGGAGCGTGAGAGGGACGCGGTGGCGGAGATGGTGGAGGCGATTAAGGTCCTTCGCGACGGGTTCGTGAGGATGGAGCAGATGAAGATGGAGATGGCGAGGGAGATCGAGAGCATGCGGATGGAGATGGAGATGAAGCGCACCGAGATGATCCTGGACTCGCAGCAGAGGATTGTTGAGGCTTTTGCTATGGCCGTTTCGCAGAAGAGGAGCAAGGGCAAGTCCACGCCCTCACCTTCATCGCAACCGTAG 966 0.6035 MASPSSPTDSNPPSAVPLPLPAPPATSSRRLPPPCWTPEETAALIDAYRDKWYSLGRTNLKATHWQEVADAVTAQCPNASPTAKTAVQCRHKMEKLRKRYRTEIQRLRNLPFPRLNNANTNSPSSWVHFKSMDSMEKGPNHKPHSDINNNNLNFHDDDDDDYLYEEFKTAPGSNTNTRSLNKLYKNNNGFNSGGSGSGSGFRIRIPAGVPQQQHTASSNKIFNSHLPPGIVPRGGGVKRERERDAVAEMVEAIKVLRDGFVRMEQMKMEMAREIESMRMEMEMKRTEMILDSQQRIVEAFAMAVSQKRSKGKSTPSPSSQP 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02286 321 Pfam Myb/SANT-like DNA-binding domain 34 135 IPR044822 -
Gma18g02286 321 MobiDBLite consensus disorder prediction 1 35 - -
Gma18g02286 321 ProSiteProfiles Myb-like domain profile. 36 97 IPR001005 -
Gma18g02286 321 MobiDBLite consensus disorder prediction 10 31 - -
Gma18g02286 321 Coils Coil 267 287 - -
Gma18g02286 321 Coils Coil 90 110 - -
Gma18g02286 321 Gene3D - 36 102 - -
Gma18g02286 321 SMART 118neu2 43 140 IPR006578 -
Gma18g02286 321 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 20 315 IPR044823 -
Gma18g02286 321 PANTHER ALCOHOL DEHYDROGENASE TRANSCRIPTION FACTOR MYB/SANT-LIKE FAMILY PROTEIN 20 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02286 Gma-Chr18 56574179 56575845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02286 35 135 Trihelix Transcription Factor Family AT3G14180 33.663 2.97e-15 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma18g02286 Myb_DNA-bind_4 3.8e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02286 - - gmx:100807518 560.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02286 18 56574179 56575845 Gma09g02245 09 48013131 48021256 GST