Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02281 ATGGCCGGCATAGACTTGGGTTCAGCATCACATTTTGTTCATCATCGCCTTGAACGCCCTGACCTTGAAGACGATGAGAACCAACAAGACCAAGACAACAACCTTAACAATCACGAAGGGCTTGACCTAGTTACACCAAATTCAGGTCCTGGTGATGTTGTTGGTCGCAGGCCAAGAGGAAGACCTCCAGGTTCAAAGAACAAGCCAAAACCACCAGTTATCATCACAAGAGAGAGTGCAAACACCCTTAGGGCTCACATCCTTGAAGTTAGTAGTGGTTGTGATGTCTTTGAATCAGTCGCTACCTATGCAAGGAAGCGACAAAGAGGGATCTGTGTCCTTAGTGGGAGTGGCACCGTGACCAACGTGACGTTGAGACAGCCAGCTGCAGCAGGTGCCGTCGTCACGCTGCACGGAAGGTTTGAGATCCTGTCTTTGTCAGGATCGTTCCTCCCACCTCCCGCTCCACCAGGTGCTACAAGTTTGACCGTGTTCCTTGGTGGAGGACAGGGTCAAGTGGTGGGAGGAAATGTTGTTGGTCCTTTGGTGGCTTCTGGGCCTGTTATTGTTATTGCTTCATCTTTTACTAATGTAGCATATGAGAGGTTGCCCTTGGATGAAGAGGAATCTATGCAGATGCAACAAGGGCAATCATCTGCTGGCGGTGGTGGTAGTGGTGGTGGAGTCAGTAATAACTCTTTTCCGGACCCGTCTTCTGGGCTTCCATTCTTCAATTTGCCCCTTAACATGCCTCAGTTACCTGTTGATGGTTGGGCTGGGAACTCTGGTGGAAGGCAATCTTACTGA 807 0.4981 MAGIDLGSASHFVHHRLERPDLEDDENQQDQDNNLNNHEGLDLVTPNSGPGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVSSGCDVFESVATYARKRQRGICVLSGSGTVTNVTLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTVFLGGGQGQVVGGNVVGPLVASGPVIVIASSFTNVAYERLPLDEEESMQMQQGQSSAGGGGSGGGVSNNSFPDPSSGLPFFNLPLNMPQLPVDGWAGNSGGRQSY 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02281 268 ProSiteProfiles PPC domain profile profile. 80 217 IPR005175 -
Gma18g02281 268 MobiDBLite consensus disorder prediction 210 239 - -
Gma18g02281 268 Gene3D - 83 218 - -
Gma18g02281 268 SUPERFAMILY AF0104/ALDC/Ptd012-like 80 213 - -
Gma18g02281 268 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 10 268 IPR014476 GO:0003680
Gma18g02281 268 MobiDBLite consensus disorder prediction 17 74 - -
Gma18g02281 268 CDD DUF296 84 159 IPR005175 -
Gma18g02281 268 Pfam Plants and Prokaryotes Conserved (PCC) domain 84 197 IPR005175 -
Gma18g02281 268 MobiDBLite consensus disorder prediction 208 245 - -
Gma18g02281 268 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 10 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02281 Gma-Chr18 56501837 56503254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02281 1 265 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 63.607 4.29e-100 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02281 - - gmx:100803960 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02281 18 56501837 56503254 Gma09g02248 09 48060091 48061516 GST