Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02270 ATGGAGGATTCGTTGGAGAATTGGATTTCACTGTTGGAAATGGAAGAATATCATGATGGGTCATTTGATGAGGAAGAGTTCCTAAGAGAGATCCTTAAGGAGGAGCAGCAGCCAGAAAATTTGTGGCCTCAAAGAGATCAAAAGCTCTCCAACACCAGCCCCACTGTGTCCTTTGATGAGGCAATTAGCTTTTGTGGGAGTGGCACTCTACATAAAAGCAACAGCTCCAACTCCATCAAGTCTTTGAAAAGATCATCATCAAGTGTCTCACCAGCCACCACTACATACCTTCTTTCTTTTGATACCTCAAGTGCTAAACCAATCACACTTAAACCTTCCCCTAAGCTTGATTTGGCACTTGGATCATCCAATAAAAGGAGTACTAGTACTGTAACTGTGGTGAAAGATGGGTGTGAATTTGAACCATTGATGATGCCCCAAAGCCAAGCAAGGAAGAAGGTTAGAAGGTCATGTGAGACACAGCATCACATTATTGCTGAGAGGAAAAGGAGACAGGAACTGACAGGGAGCATTATAGCACTTGCAGCAACTATTCCTGGGCTCAAGAGGATGGACAAGGCTTATGTGCTTCGTGAAGCTGTCAATTACACAAAACAACTTCAAGAGCGAGTTAAAGAGTTGGAAAATCAAAACAAAGTAGATTCAGCAACATTCATAAGGAAATCTCAAGCTTCCTCACATTGTGAAACGAACAAAGAAATATCACTATTTGAGGTTGAAGCAAGAGTCTTAGATGAGGAAGTACTCATTGGAATCCATTGTGAGAAACAAAAGGACATAGTGTTCAAAATACATGCCTTGCTTGGAAAGCTCCATCTCTCTACAACCAGTAGCACCGTACTGCCATTTGGGACTTCTACTCTTATAATCAACATTATTGCTCAGATGAATGGCGAAAACAGCATGACCATGCATGACCTAGTGAAAAAACTGAGAGATTATCTATTGGAGGTGTATGACATGCAATAG 990 0.4141 MEDSLENWISLLEMEEYHDGSFDEEEFLREILKEEQQPENLWPQRDQKLSNTSPTVSFDEAISFCGSGTLHKSNSSNSIKSLKRSSSSVSPATTTYLLSFDTSSAKPITLKPSPKLDLALGSSNKRSTSTVTVVKDGCEFEPLMMPQSQARKKVRRSCETQHHIIAERKRRQELTGSIIALAATIPGLKRMDKAYVLREAVNYTKQLQERVKELENQNKVDSATFIRKSQASSHCETNKEISLFEVEARVLDEEVLIGIHCEKQKDIVFKIHALLGKLHLSTTSSTVLPFGTSTLIINIIAQMNGENSMTMHDLVKKLRDYLLEVYDMQ 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02270 329 SMART finulus 164 213 IPR011598 GO:0046983
Gma18g02270 329 Gene3D - 147 221 IPR036638 GO:0046983
Gma18g02270 329 Pfam Helix-loop-helix DNA-binding domain 161 208 IPR011598 GO:0046983
Gma18g02270 329 Coils Coil 197 224 - -
Gma18g02270 329 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 158 207 IPR011598 GO:0046983
Gma18g02270 329 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 161 224 IPR036638 GO:0046983
Gma18g02270 329 PANTHER BHLH TRANSCRIPTION FACTOR 4 328 - -
Gma18g02270 329 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 4 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02270 Gma-Chr18 56405718 56410009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02270 155 322 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 47.514 6.98e-39 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma18g02270 HLH 3.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02270 - - gmx:100806078 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02270 18 56405718 56410009 Gma09g02261 09 48129673 48132387 GST