Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02257 ATGGGGTCTATGAATTTGTTAGGTTTTTCTCTCTCTCCTCAAGAACACCCTTCTAGTCAAGATCACTCTCAAACGGCACCTTCTCGTTTTTGCTTCAACCCTGATGGAATCTCAAGCACTGATGTAGCAGGAGACTGCTTTGATCTCACTTCTGACTCAACTCCTCATTTACTCAACCTTCCCTCTTACGGCATATACGAAGCTTTTCATAGGAGCAACAATATTCACACCACTCAAGattggaAGGAGAACTACAACAGCCAAAACTTGCTATTGGGAACTTCATGCAGCAACCAAAACATGAACCACAACCATCAGCAACAACAACAACAACAGCCAAAGCTTGAAAACTTCCTCGGTGGACACTCATTTGGTGAACATGAGCAACCCTACGGTGGTAACTCAGCCTCTACAGAATACATGTTCCCGGCTCAGCcggtattggccggtggcggcggcggtggtagcaatagcagcaacacaagcaacagtagctccaTAGGGTTATCCATGATAAAGACATGGTTGAGGAACCAACCACCACACTCAGAAAACAACAATAACAACAACAATGAAAGTGGTGGCAATAGTAGAAGCAGTGTGCAGCAGACTCTATCACTTTCCATGAGTACTGGTTCACAATCAAGCACATCACTACCCCTTCTCACTGCTAGTGTGGATAATGGAGAGAGTTCTTCTGATAACAAACAACCACATACCACGGCTGCACTTGATACAACCCAAACCGGAGCCATTGAAACTGCACCCAGAAAGTCCATTGACACTTTTGGACAGAGAACTTCTATCTACCGTGGTGTAACAAGGCATAGGTGGACGGGGAGGTATGAGGCTCACCTGTGGGATAATAGTTGTAGAAGAGAGGGACAAACTCGCAAAGGAAGGCAAGGAGGTTATGACAAAGAAGAAAAGGCAGCTAGAGCCTACGATTTGGCAGCACTAAAATACTGGGGAACAACTACGACAACAAATTTTCCAATTAGCCACTATGAGAAAGAGTTGGAAGAAATGAAGCACATGACTAGGCAAGAGTACGTTGCGTCATTGAGAAGGAAGAGTAGTGGGTTTTCTCGCGGGGCATCCATTTATCGAGGTGTGACGAGACACCATCAACATGGAAGATGGCAAGCGAGGATTGGAAGAGTTGCTGGCAACAAGGATCTCTACTTGGGAACTTTCAGCACCCAAGAGGAGGCAGCAGAAGCATATGATGTAGCAGCAATCAAATTCAGAGGACTAAGTGCTGTTACAAACTTTGACATGAGCAGATATGACGTGAAAAGCATACTTGAGAGCACCACTTTGCCAATTGGTGGTGCTGCAAAGCGTTTGAAGGATATGGAGCAGGTGGAACTGAGGGTGGAGAATGTTCATAGAGCAGATCAAGAAGATCATAGTAGCATCATGAACTCTCACTTAACTCAAGGAATCATTAACAACTATGCAGCAGGAGGAACAACAACGACTCATCATCATAACTGGCACAATGCTCTTGCATTCCACCAACCTCAACCTTGCACCACCATACACTACCCTTATGGACAAAGAATTAATTGGTGCAAGCAAGAACAAGACAACTCTGATGCCTCTCACTCTTTGTCTTATTCAGATATTCATCAACTACAGCTAGGGAACAATGGCACACACAACTTCTTTCACACAAATTCAGGGTTGCACCCTATGTTAAGCATGGATTCTGCTTCCATTGACAATAGCTCTTCATCTAACTCTGTTGTTTATGATGGTTATGGAGGTGGTGGGGGCTATAATGTGATTCCTATGGGGACTACTACTACTGTTGTTGCAAATGATGGTGATCAAAATCCAAGAAGCAATCATGGTTTTGGTGATAATGAGATAAAGGCACTTGGTTATGAAAGTGTGTATGGTTCTACAACTGATCCTTATCATGCACATGCAAGGAACTTGTATTATCTTACTCAACAGCAACCATCTTCTGTTGATGCAGTGAAGGCTAGTGCATATGATCAAGGATCTGCATGCAATACTTGGGTTCCAACTGCTATTCCAACTCATGCACCAAGGTCTAGTACTAGTATGGCTCTCTGCCATGGTGCTACGCCCTTCTCTTTATTGCATGAATAG 2124 0.4237 MGSMNLLGFSLSPQEHPSSQDHSQTAPSRFCFNPDGISSTDVAGDCFDLTSDSTPHLLNLPSYGIYEAFHRSNNIHTTQDWKENYNSQNLLLGTSCSNQNMNHNHQQQQQQQPKLENFLGGHSFGEHEQPYGGNSASTEYMFPAQPVLAGGGGGGSNSSNTSNSSSIGLSMIKTWLRNQPPHSENNNNNNNESGGNSRSSVQQTLSLSMSTGSQSSTSLPLLTASVDNGESSSDNKQPHTTAALDTTQTGAIETAPRKSIDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQGGYDKEEKAARAYDLAALKYWGTTTTTNFPISHYEKELEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGLSAVTNFDMSRYDVKSILESTTLPIGGAAKRLKDMEQVELRVENVHRADQEDHSSIMNSHLTQGIINNYAAGGTTTTHHHNWHNALAFHQPQPCTTIHYPYGQRINWCKQEQDNSDASHSLSYSDIHQLQLGNNGTHNFFHTNSGLHPMLSMDSASIDNSSSSNSVVYDGYGGGGGYNVIPMGTTTTVVANDGDQNPRSNHGFGDNEIKALGYESVYGSTTDPYHAHARNLYYLTQQQPSSVDAVKASAYDQGSACNTWVPTAIPTHAPRSSTSMALCHGATPFSLLHE 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02257 707 MobiDBLite consensus disorder prediction 186 257 - -
Gma18g02257 707 SMART rav1_2 269 338 IPR001471 GO:0003700|GO:0006355
Gma18g02257 707 SMART rav1_2 368 432 IPR001471 GO:0003700|GO:0006355
Gma18g02257 707 ProSiteProfiles AP2/ERF domain profile. 269 332 IPR001471 GO:0003700|GO:0006355
Gma18g02257 707 SUPERFAMILY DNA-binding domain 268 334 IPR016177 GO:0003677
Gma18g02257 707 CDD AP2 268 334 IPR001471 GO:0003700|GO:0006355
Gma18g02257 707 SUPERFAMILY DNA-binding domain 367 428 IPR016177 GO:0003677
Gma18g02257 707 PANTHER BNAC02G44180D PROTEIN 5 624 - -
Gma18g02257 707 Pfam AP2 domain 269 324 IPR001471 GO:0003700|GO:0006355
Gma18g02257 707 Pfam AP2 domain 368 418 IPR001471 GO:0003700|GO:0006355
Gma18g02257 707 Gene3D AP2/ERF domain 368 428 IPR036955 GO:0003700|GO:0006355
Gma18g02257 707 Gene3D AP2/ERF domain 269 334 IPR036955 GO:0003700|GO:0006355
Gma18g02257 707 CDD AP2 367 428 IPR001471 GO:0003700|GO:0006355
Gma18g02257 707 PRINTS Ethylene responsive element binding protein signature 270 281 IPR001471 GO:0003700|GO:0006355
Gma18g02257 707 PRINTS Ethylene responsive element binding protein signature 408 428 IPR001471 GO:0003700|GO:0006355
Gma18g02257 707 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 5 624 - -
Gma18g02257 707 ProSiteProfiles AP2/ERF domain profile. 368 426 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02257 Gma-Chr18 56276621 56281217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02257 166 453 AP2-EREBP Transcription Factor Family AT5G17430 70.447 3.98e-134 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Gma18g02257 AP2 3.8e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02257 K09285 - gmx:100797584 1299.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02257 18 56276621 56281217 Gma09g02272 09 48233330 48237923 GST