Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02241 ATGGCCATGGAAAATCAAAATTTTCTAGAGTATTGGGTTTTGCCACTACTTATGATGCTTTTGTTGGGTCATTGGATCTCTGTTCAAGCTGCCCCTTCACCCTCTCTCATCACTCAACTCCCTGGCTTTAACGCCAATTTCCCATCCAAGCACTATTCCGGGTATATAAGTATTGATGGAAATGCTGAAAGTGGGAAGAACCTGTTCTACTACTTTGTTAGTTCAGAAAGTAGTCCAGAGAAGGACCCAGTTGTGCTATGGCTGAATGGTGGACCTGGGTGCTCCAGCTTTGATGGCTTTGTTTACGAGCATGGACCATTCAACTTTGAGGCTGCAAATTCAAAAGGGAATCTACCCACTTTGCATATCAATCCTTACAGCTGGTCTAAGGTTTCCAACATTATATATTTGGACTCCCCTGCTGGTGTTGGGCTCTCTTACTCCAAGAACACaagcaaatatgccactggggatctagaaactgcgtctgatacccatgttttcctcttaaagTGGTTTCAGCAATTTCCGGAATTCCAGGCTAATCCATTTTATATTGCTGGAGAGTCTTATGCCGGAGTTTATGTGCCTACTCTTGCTTTTGAAGTTGCTAAAGGAATCCGGAGTGGTACAAAGCCCGTGATCAATTTTAAGGGTTACATGGTTGGAAATGGTGTCACGGACGAAATATTTGACGGCAATGCTCTTATCCCATTTGTGCACGGGATGGGCCTCATATCCGACAGTATCTATGAGAATTTACAATCTTCTTGCAAAGGAAACTACTACGATGCTTACTCTTTGGACGAAAATGATGTGTGTTACAAGACCATTGAAAAAGTTGATAGGGCCATTGATGGGCTTAACGTGTACAACATACTAGAGCCATGCTACCATTTCCCCGATGCTGCCACAGCCAAAGAAAATGGAACCTTACCAAGGAGTTTCAAGCAATTAGGAGTTACTGAGAGGCCTCTCCCAGTGAGAAAGAGAATGTTTGGTAGAGCTTGGCCTTTTAGAGCACCAGTCAAACCTGGTCTTGTTCCATTATGGCCCCAATTGGCTCAAACTAGGCACGTCGCATGTGTTAGTGATGAAGTAGCAAGTTCATGGCTAAACAACGTTGCAGTCAGGAAAGCCATCCATGCTGAATCGGAAAAAGTGGCGGGTCCGTGGGAATTATGTTCGAGTAGGATAGAGTACCATCACAATGCTGGAAGCATGATTCCTTACCACAAGAACCTAACCAGGCTTGGCTATAGGGCACTTATTTTCAGTGGCGACCATGATATGTGTGTACCGTTTACTGGAAGTGAGGCTTGGACACGATCTTTGGGTTACAAGATTGTGGATGAATGGAGGCCATGGAACTCAAATAACCAAGTTGCTGGGTACTTGCAAGCGTACGAGAACAACCTCACCTTCCTCACAATCAAGGGAGCTGGGCACACCGTGCCGGAATATAAGCCGCGGGAGGCGTTGGATTTTTACAGCCGTTGGTTGGAAGGGAAGCTAATATAA 1521 0.4326 MAMENQNFLEYWVLPLLMMLLLGHWISVQAAPSPSLITQLPGFNANFPSKHYSGYISIDGNAESGKNLFYYFVSSESSPEKDPVVLWLNGGPGCSSFDGFVYEHGPFNFEAANSKGNLPTLHINPYSWSKVSNIIYLDSPAGVGLSYSKNTSKYATGDLETASDTHVFLLKWFQQFPEFQANPFYIAGESYAGVYVPTLAFEVAKGIRSGTKPVINFKGYMVGNGVTDEIFDGNALIPFVHGMGLISDSIYENLQSSCKGNYYDAYSLDENDVCYKTIEKVDRAIDGLNVYNILEPCYHFPDAATAKENGTLPRSFKQLGVTERPLPVRKRMFGRAWPFRAPVKPGLVPLWPQLAQTRHVACVSDEVASSWLNNVAVRKAIHAESEKVAGPWELCSSRIEYHHNAGSMIPYHKNLTRLGYRALIFSGDHDMCVPFTGSEAWTRSLGYKIVDEWRPWNSNNQVAGYLQAYENNLTFLTIKGAGHTVPEYKPREALDFYSRWLEGKLI 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02241 506 Gene3D - 408 503 - -
Gma18g02241 506 Gene3D alpha/beta hydrolase 30 325 IPR029058 -
Gma18g02241 506 PANTHER CARBOXYPEPTIDASE 20 505 - -
Gma18g02241 506 ProSitePatterns Serine carboxypeptidases, serine active site. 186 193 IPR018202 GO:0004185
Gma18g02241 506 ProSitePatterns Serine carboxypeptidases, histidine active site. 473 490 IPR033124 GO:0004185
Gma18g02241 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 136 IPR001563 GO:0004185|GO:0006508
Gma18g02241 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 147 IPR001563 GO:0004185|GO:0006508
Gma18g02241 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 197 IPR001563 GO:0004185|GO:0006508
Gma18g02241 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 473 486 IPR001563 GO:0004185|GO:0006508
Gma18g02241 506 Pfam Serine carboxypeptidase 41 503 IPR001563 GO:0004185|GO:0006508
Gma18g02241 506 SUPERFAMILY alpha/beta-Hydrolases 37 504 IPR029058 -
Gma18g02241 506 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 20 505 IPR001563 GO:0004185|GO:0006508
Gma18g02241 506 Gene3D - 362 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02241 Gma-Chr18 56150751 56156846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02241 367 504 Calmodulin-binding Proteins AT2G22960 50.000 1.33e-41 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02241 K16296 - gmx:100790895 1038.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02241 18 56150751 56156846 Gma09g02285 09 48340374 48346040 GST
Gma18g02241 18 56150751 56156846 Gma07g00579 07 5613987 5617254 PCT
Gma18g02241 18 56150751 56156846 Gma16g00277 16 2935797 2938562 PCT